| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0430 |
|---|
| Symbol | |
|---|
| ID | 4255662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 489220 |
|---|
| End bp | 490941 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638121044 |
|---|
| Product | NACHT family-like NTPase |
|---|
| Protein accession | YP_736490 |
|---|
| Protein GI | 114045940 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5635] Predicted NTPase (NACHT family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00169219 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAAC AAGTTGTTGT TACCGAATCC TTCAAAGCAA TATTTAATGA AGCTATCGCC
TTTATTAAGT CAAAATCAAA GTCTTTTAAA ACCCTTAACC AAATAAAGCT TGAAGATGCA
TACGCTAAAG CAGCAAACGT CGAAAACGTT AAAACCATAT GGCAAATAGA CAAAAGCGTA
AACTTAAATG AATTCTATCA CCCATCAACA ATTAAAGTAT TAGACCAGCT AATATGTGTA
GACTCTTTAA ATATATTCCC TGAAAATGGT AAAATTGTTA TCCAAGGTAC CGCTGGACAA
GGAAAATCCA TTCTCTTAAG ATATTTGGCA GGAGTTAATC TAAAAAAGGG AAAAACTATT
CCTATTTTTA TAGAACTTAG AAAAATTACT GAAAAAACAA ACCTTTCCGC CTTAATAGCA
ATGTCCATGT CAGAGCTGGG TATTAATATA GAGGAAAAGG ATCTTGAATT TATATTTTCT
TCTGGAAAAT TCACGTTATT ATTGGATGCC TTTGATGAAA TACCAGAATT ATGTTTAAAA
GACACTCTGT TATCCATAGA AAATATTTGT GCTAGGAATT ATAATCAGCA AATAATTATT
ACATCACGCC CGGGTTCTGA CATCCAAAAA GTATCTTATT TTTCAGTATA TAATCTTCAA
CCTCTAAAGC CCCCCGATTT CAAACCTATG CTGCAAAAAT TCTTTGACGA TGAAGTAACT
GTTCATCGAA TAATGAAAGC ATTAAACGAA AATAATAGTA CCATTACTAA GTTAATAACC
ACCCCCTTAC TATTAACCTT ATTGGCCATA ACATATAAAA CGTATCATAA GATACCAACC
CAACTTCATG AGTTTTATGA AAATATATTT CATGTATTAG CTAATCGACA CGACGCAACA
AAGCCTGGCT TTAGACGAGA ATATAAATCA GGTTTAAATG AGCGTGAGCT AGAAGATCTT
TTCTGTGCAT TTTGTTTTTA TAGCATGATT GAAGATAAGA GTTCTCTTTC AAGGCAAGAA
GCATTAAGTG TCACTAAAAA GGCAATCCAC TTCTTAAGTA TAAATCCAAT TTCTGAGTTT
TCATTCTTAA GTGATTGCAT AAAAAACACC TGCTTACTAT TAGAAGAAGG TTTTAGTTAT
CATTACATAC ATAAAAGTAT AAGGGAGTAT CACTCAGCTA AATTCATCAG CATTAGCCCT
ATAGAGCTAA AAGAGAAGTT TTACACAATA GCAACATCAA ACTTTTACAA ATACAGAGTC
GAGCTTGAGT TTTTAAAAGT AATTGACGAA CACTGTTTTT ACAAAAATTT CTTTCTACCA
ATCTACAGGA AAATATTTGA TGACCTTGGA ATCTCAACAG AATATAGAGA AGTCAATTAT
CAAGAATTAC TTTTAGACTC AAAGATTATT TTTGAAAAAC ATGGTTCAGA GATGTTACTT
CACGCCTTTG CATTTTCTGA ACGACCTGCT TTAAACTTGG ATTACATGAA CGACCTTCAT
GACAAACTAC TAAATTCAAT ATTCAAACTA GTTAGAAAGT TTGAGATAAA CCAAAAACAA
TCTGAACACA TATTAATTAC AGAAATAATA AAAAATGAAG GCCTTGAGGA TGAATTCAAT
ATCATCATTA ACGAATGCAT AGAAACAATG TTTAAACGAT ACTCTGAGGC AAACTTAAAG
TTCAGAAGTA AAAATGAATT AATATCAAAT ATGAGCTTTT AA
|
|---|
| Protein sequence | MLEQVVVTES FKAIFNEAIA FIKSKSKSFK TLNQIKLEDA YAKAANVENV KTIWQIDKSV
NLNEFYHPST IKVLDQLICV DSLNIFPENG KIVIQGTAGQ GKSILLRYLA GVNLKKGKTI
PIFIELRKIT EKTNLSALIA MSMSELGINI EEKDLEFIFS SGKFTLLLDA FDEIPELCLK
DTLLSIENIC ARNYNQQIII TSRPGSDIQK VSYFSVYNLQ PLKPPDFKPM LQKFFDDEVT
VHRIMKALNE NNSTITKLIT TPLLLTLLAI TYKTYHKIPT QLHEFYENIF HVLANRHDAT
KPGFRREYKS GLNERELEDL FCAFCFYSMI EDKSSLSRQE ALSVTKKAIH FLSINPISEF
SFLSDCIKNT CLLLEEGFSY HYIHKSIREY HSAKFISISP IELKEKFYTI ATSNFYKYRV
ELEFLKVIDE HCFYKNFFLP IYRKIFDDLG ISTEYREVNY QELLLDSKII FEKHGSEMLL
HAFAFSERPA LNLDYMNDLH DKLLNSIFKL VRKFEINQKQ SEHILITEII KNEGLEDEFN
IIINECIETM FKRYSEANLK FRSKNELISN MSF
|
|---|
| |