| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0394 |
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| Symbol | |
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| ID | 4256486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 438002 |
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| End bp | 440728 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120999 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_736454 |
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| Protein GI | 114045904 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000626619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000563606 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTGGTA AATTACTGAC AAAAGTATTT GGTAGTCGCA ACGACCGTAC CCTCAAAGGG
TTACAAAAAG TAGTTAATAA GATTAATGCG CTTGAAGCCG ATTATGAAAA ATTAACCGAT
GAACAGCTTA AAGCGAAAAC TGCCGAGTTT CGTGAGCGTT TGGCGGCTGG TGCCTCATTA
GATAGCATCA TGGCGGAAGC CTTCGCAACA GTGCGTGAAG CATCGAAACG AGTGTTCGAG
ATGCGTCACT TCGACGTGCA GTTACTCGGT GGTATGGTGC TTGACAGTAA CCGCATCGCT
GAAATGCGTA CCGGTGAAGG TAAAACCTTA ACCGCGACCC TGCCAGCCTA TTTAAATGCC
TTAACTGGCA AAGGCGTTCA CGTGATTACC GTCAACGATT ACTTAGCCCG TCGTGACGCG
GAAAATAACC GCCCACTGTT CGAGTTCTTA GGTTTAACTG TTGGGATCAA CGTTGCAGGC
CTTAGCCAGC AGGCAAAGAA AGACGCCTAT AACGCCGATA TTACCTATGG TACCAACAAT
GAATTTGGTT TCGACTACTT ACGCGATAAC ATGGCGTTTT CGCCACAGGA ACGTGTTCAA
CGTCCATTGC ACTATGCACT GATCGACGAA GTCGACTCAA TCCTTATCGA TGAAGCCCGT
ACGCCATTGA TTATCTCTGG TGCCGCGGAA GATAGCTCTG AGCTATACAT CAAGATCAAC
ACGCTTATCC CGAATCTTAT CCGTCAAGAT AAAGAAGACT CTGAAGAGTA CGTGGGTGAG
GGTGACTACA GCATCGATGA AAAAGCCAAA CAAGTGCATT TTACCGAGCG TGGTCAGGAG
AAGGTTGAGA ACCTGTTAAT TGAGCGCGGC ATGTTAGCCG AAGGCGACTC ACTCTACTCA
GCGGCAAATA TTTCCCTGCT GCACCATGTG AACGCGGCGC TCCGTGCTCA CACTCTGTTC
GAGCGTGATG TTGACTATAT CGTCCAAGAC GGCGAAGTGA TCATCGTTGA CGAACATACT
GGCCGTACTA TGCCAGGCCG TCGTTGGTCA GAAGGTTTAC ATCAAGCCGT CGAAGCCAAA
GAAGGCGTGC GTATCCAAAA CGAAAACCAA ACGCTGGCAT CGATTACCTT CCAGAACTAC
TTCCGTCAAT ACGAGAAGCT GGCAGGTATG ACAGGTACTG CCGACACTGA AGCGTTCGAA
TTCCAACACA TCTATGGATT AGACACAGTT GTTGTGCCAA CCAACCGTCC TATGGTGCGT
AAGGATATGG CCGATCTGGT TTACCTCACA GCCAATGAAA AATACCAAGC AATTATTAAA
GACATTAAAG ACTGCCGTGA ACGTGGCCAG CCAGTATTGG TGGGTACGGT TTCCATCGAA
CAGTCTGAAC TGTTAGCGCG TTTGATGGTG AAGGAGAAGA TCCCGCACCA AGTGCTTAAC
GCTAAGTTCC ACGAAAAAGA AGCCGAAATT GTTGCCCAAG CGGGTCGTAC TGGCGCCGTG
ACGATTGCGA CTAACATGGC GGGTCGTGGT ACCGACATCG TGTTAGGTGG CAACTGGAAT
ATGGAAATCG AAGCCCTCGA GAATCCAACA GCAGAGCAAA AAGCTAAAAT CAAGGCTGAC
TGGCAAGAGC GCCACGATGC CGTGGTCGCC GCTGGTGGTT TACACATCTT AGGTACTGAG
CGCCACGAAT CTCGCCGTAT CGATAACCAG CTACGTGGTC GTGCGGGTCG TCAAGGTGAC
GCGGGTTCTT CACGTTTCTA CCTTTCTATG GAAGATAGCT TAATGCGCAT CTTCGCCTCG
GATCGTGTCT CTGGCATGAT GAAGAAGCTG GGGATGGAAG AAGGCGAAGC AATCGAGCAT
CCATGGGTTT CCCGTGCGAT TGAAAACGCT CAGCGCAAAG TGGAAGCGCG TAACTTTGAT
ATTCGTAAGC AACTGCTCGA ATTTGACGAC GTCGCAAACG ACCAACGTCA AGTGGTTTAC
GCACAGCGTA ACGAGTTGAT GGATGCCGAA AGTATCGAAG ACACCATCAA AAACATCCAA
GACGATGTGA TTAGTGCGGT GATCGATCAA TACATTCCAC CACAATCAGT GGAAGAGTTA
TGGGATGTGC CAGGTTTAGA GCAACGTTTA CAGCAAGAAT TTATGCTGAA ACTGCCAATC
CAAGAATGGC TAGATAAAGA AGACGACTTA CACGAAGAAA CATTGCGTGA GCGTATCATC
ACTTCTTGGT CTGATGCGTA TAAAGCAAAA GAAGAAATGG TGGGGGCGCC AGTACTGCGC
CAGTTCGAAA AAGCCGTGAT GTTGCAAACC CTCGATGGTC TGTGGAAAGA ACACTTAGCG
GCAATGGATC ACTTACGCCA AGGTATCCAC TTACGTGGTT ACGCGCAGAA GAATCCAAAG
CAAGAATATA AACGCGAGTC TTTTGAACTG TTCCAGCAAT TACTGTCGAC CTTAAAGCAT
GACGTTATTA GCGTACTATC TAAGGTACAA GTACAAGCAC AGTCAGACGT AGAAGAGATG
GAAGCTCGTC GCCGTGAAGA AGATGCCAAG ATCCAACGCG ACTATCAGCA CGCAGCAGCC
GAAGCCTTAG TGGGTGGGGA TGATGGTAGC GACGAGATGA TGGCTCATAC GCCAATGATC
CGCGATGGCG ATAAAGTGGG TCGTAACGAT CCTTGTCCTT GTGGCTCTGG CCGTAAGTAT
AAGCAGTGTC ACGGCAAGCT AAGTTAA
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| Protein sequence | MFGKLLTKVF GSRNDRTLKG LQKVVNKINA LEADYEKLTD EQLKAKTAEF RERLAAGASL
DSIMAEAFAT VREASKRVFE MRHFDVQLLG GMVLDSNRIA EMRTGEGKTL TATLPAYLNA
LTGKGVHVIT VNDYLARRDA ENNRPLFEFL GLTVGINVAG LSQQAKKDAY NADITYGTNN
EFGFDYLRDN MAFSPQERVQ RPLHYALIDE VDSILIDEAR TPLIISGAAE DSSELYIKIN
TLIPNLIRQD KEDSEEYVGE GDYSIDEKAK QVHFTERGQE KVENLLIERG MLAEGDSLYS
AANISLLHHV NAALRAHTLF ERDVDYIVQD GEVIIVDEHT GRTMPGRRWS EGLHQAVEAK
EGVRIQNENQ TLASITFQNY FRQYEKLAGM TGTADTEAFE FQHIYGLDTV VVPTNRPMVR
KDMADLVYLT ANEKYQAIIK DIKDCRERGQ PVLVGTVSIE QSELLARLMV KEKIPHQVLN
AKFHEKEAEI VAQAGRTGAV TIATNMAGRG TDIVLGGNWN MEIEALENPT AEQKAKIKAD
WQERHDAVVA AGGLHILGTE RHESRRIDNQ LRGRAGRQGD AGSSRFYLSM EDSLMRIFAS
DRVSGMMKKL GMEEGEAIEH PWVSRAIENA QRKVEARNFD IRKQLLEFDD VANDQRQVVY
AQRNELMDAE SIEDTIKNIQ DDVISAVIDQ YIPPQSVEEL WDVPGLEQRL QQEFMLKLPI
QEWLDKEDDL HEETLRERII TSWSDAYKAK EEMVGAPVLR QFEKAVMLQT LDGLWKEHLA
AMDHLRQGIH LRGYAQKNPK QEYKRESFEL FQQLLSTLKH DVISVLSKVQ VQAQSDVEEM
EARRREEDAK IQRDYQHAAA EALVGGDDGS DEMMAHTPMI RDGDKVGRND PCPCGSGRKY
KQCHGKLS
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