Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0368 |
Symbol | |
ID | 4257751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 408471 |
End bp | 410039 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638120973 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_736428 |
Protein GI | 114045878 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAACA GAGTAATTAT ATTTGATACC ACCTTACGTG ATGGCGAGCA GGCGTTAGCG GCAAGCCTGT CGGTCAAAGA AAAGTTACAG ATCGCCATGG CGTTAGAACG TCTCGGTGTG GATGTGATGG AAGTGGGGTT CCCTGTGTCG TCACCCGGTG ATTTTGAGTC GGTGCAGACC ATTGCCCGTA CCATCAAAAA TAGCCGTGTA TGCGCCTTAT CTCGCGCACT TGAAAAGGAC ATCGATGCCG CCGCTCAGGC ATTATCCGTT GCCGAACAGT TCCGTATTCA TACCTTTATC TCCACCTCCA CTATCCATGT GGAGAGCAAG TTAAAGCGCT CATTCGAGCA AGTGTTGGAG ATGGCGGTAG GCGCGGTGAA ATATGCCCGT AGGTTTACCG ATGATGTGGA GTTTTCCTGC GAAGATGCGG GACGCACGCC AATCGATAAT CTGTGCCGTA TGGTGGAAGC GGCGATTCAT GCTGGCGCTC GCACCATCAA TATCCCAGAT ACCGTGGGTT ACACAGTGCC AAGCGAGTTT GGTGGCATTA TTCAAACCCT GTTTAATCGC GTACCGAATA TCGACCAAGC CATTATTTCG GTTCACTGCC ACGATGACTT AGGCATGTCG GTAGCCAATT CGATTACCGC CGTGCAGCAT GGCGCCCGCC AAATCGAATG TACCATGAAC GGTATTGGTG AGCGTGCGGG TAACTGCTCC CTAGAAGAAA TCGCCATGAT CTTAGCAACG CGTAAGAATC TGTTGGGAGT TGAAACTGGG ATCAATGCTA AGGAGATCCA CCGCACGTCG AATCTAGTCA GCCAGTTATG CAATATGCCG ATCCAGTCGA ATAAGGCGAT TGTGGGGGCC AATGCCTTTA CTCACTCTTC AGGTATTCAC CAAGATGGCA TGTTAAAGGC GCAAAATACC TATGAAATCA TGACGCCAGA GAGTATCGGC CTAAACCGAA ACAACCTGAA TATGACCTCG CGCTCCGGCC GCCATGTGAT TAAGCATCGC ATGGAGGAAA TGGGCTACAG TGAGCAGAAT TACAATCTGG ACGCCCTCTA CGAACAGTTT TTACATTTGG CGGATAAAAA GGGCCAAGTC TTCGATTACG ACTTAGAAGC CTTAGCCTTT ATGGAAGCGC AAGCGGCGGA AGATAACTTC TATCAATTAC AGCAGTTAGT GGTGCAGTCC GACTCCACCG AAGGCGTTGC TACGGCAACA GTGCGCATCG ATGTCGGCGG TGAAATTAAA ACCGAAGCCG CGACCGGTAA TGGTCCCGTC GATGCCGCCT ATAACGCCAT TGCCCGTGCG ACGGACCGTC GTATCGATAT CATCAGCTAC AAATTGAGCG CCAAGGGCGA GGGGCAAAAT GCCTTGGGCC AAGTCGACAT TACCGCGGTT TACCATGAGC AAAATTTCCA CGGTGTCGGG TTAGCGACCG ACGTGGTTGA GGCATCAGCC CGTGCGTTAG TGCATGTGAT GAACCTGACA TGCCGCGCCG ATAAGGTCGC AGATTACAAA CAGAATATGC ATAAAAACAG AGAGCTGGGC GGCGTATAG
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Protein sequence | MSNRVIIFDT TLRDGEQALA ASLSVKEKLQ IAMALERLGV DVMEVGFPVS SPGDFESVQT IARTIKNSRV CALSRALEKD IDAAAQALSV AEQFRIHTFI STSTIHVESK LKRSFEQVLE MAVGAVKYAR RFTDDVEFSC EDAGRTPIDN LCRMVEAAIH AGARTINIPD TVGYTVPSEF GGIIQTLFNR VPNIDQAIIS VHCHDDLGMS VANSITAVQH GARQIECTMN GIGERAGNCS LEEIAMILAT RKNLLGVETG INAKEIHRTS NLVSQLCNMP IQSNKAIVGA NAFTHSSGIH QDGMLKAQNT YEIMTPESIG LNRNNLNMTS RSGRHVIKHR MEEMGYSEQN YNLDALYEQF LHLADKKGQV FDYDLEALAF MEAQAAEDNF YQLQQLVVQS DSTEGVATAT VRIDVGGEIK TEAATGNGPV DAAYNAIARA TDRRIDIISY KLSAKGEGQN ALGQVDITAV YHEQNFHGVG LATDVVEASA RALVHVMNLT CRADKVADYK QNMHKNRELG GV
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