Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0364 |
Symbol | |
ID | 4257747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 402549 |
End bp | 403433 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638120969 |
Product | transporter DMT superfamily protein |
Protein accession | YP_736424 |
Protein GI | 114045874 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGATA ACGAATACCG CAAAGGGATC CTACTTGCCG TCAGTGCTTA CTGTATGTGG GGATTTGCGC CCTTATATTT CAAACTACTC CACCATGTTT CGGCGACCGA AATTTTATTG CATCGGGTGA TCTGGTCATT TGTGTTTATG GTGATCATCA TGCTGTTTAT CGGTGGCTTT GGAAAACTTC GCCAGCTGTT TAAACAGCCC AAACAGCTAC TCGTACTCAC CATAACCTCC CTATTAATTG CGGCCAACTG GTTGATTTTT ATCTGGGCTG TGAATAACGA TCATATGCTC GATGCCAGCT TGGGTTACTT TATTAACCCC CTACTGAATG TGCTGCTCGG CATGCTGTTT TTAGGTGAAA GATTACGTAA GTTGCAATGG TTTGCCGTCG CGCTGGCGAG TGCTGGCGTG CTGATCCAAT TAGTCTCATT CGGCTCGATC CCTATTGTCT CCCTCGCCTT AGCGGGCACC TTCGGGGTAT ATGCTCTGCT GCGTAAAAAG GTCAATGTGG ATGCTAAATC GGGTTTGCTA GTCGAAACCG CCATCCTGCT ACCGGTCGCA TTGGTTTATC TGGTCGCGAC CTTAGATAGC GCCACGGCGA ATATGCTGAC CAACGATTGG CACCTTAATT TATTGTTGAT GGCAGCCGGG ATTGTTACCA CGATTCCACT ATTGTGTTTT GCCGGTGCAG CGGTACGTAT TCCATTGTCT ATGCTCGGCT TTTTCCAATA TATCGGCCCG AGTATTATGT TTATCCTCGC GGTAACCTTA TTCAATGAAC CCTTCGATGC CGAGAAGAGC ATCACCTTTG GCTTTATCTG GAGCGCCCTG TTGGTGTTCA CCTTCGATAT GGCCTATAAA CGCAAAACGG CGTGA
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Protein sequence | MPDNEYRKGI LLAVSAYCMW GFAPLYFKLL HHVSATEILL HRVIWSFVFM VIIMLFIGGF GKLRQLFKQP KQLLVLTITS LLIAANWLIF IWAVNNDHML DASLGYFINP LLNVLLGMLF LGERLRKLQW FAVALASAGV LIQLVSFGSI PIVSLALAGT FGVYALLRKK VNVDAKSGLL VETAILLPVA LVYLVATLDS ATANMLTNDW HLNLLLMAAG IVTTIPLLCF AGAAVRIPLS MLGFFQYIGP SIMFILAVTL FNEPFDAEKS ITFGFIWSAL LVFTFDMAYK RKTA
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