Gene Shewmr7_0359 details

Gene Information

• Locus tag: Shewmr7_0359
• Symbol: radC
• ID: 4257742
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. MR-7
• Kingdom: Bacteria
• Replicon accession: NC_008322
• Strand: +
• Start bp: 399006
• End bp: 399683
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 638120964
• Product: DNA repair protein RadC
• Protein accession: YP_736419
• Protein GI: 114045869
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2003] DNA repair proteins
• TIGRFAM ID: [TIGR00608] DNA repair protein radc

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.088498
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGATTA AGGATTGGCC CGAGGGTGAA GGCCCGCGGG ATAAATTATT AGTAAAAGGC 
GCTGCCCACC TCTCGGATGC GGAATTACTG GCCGTTTTAC TGCGTAATGG ACTGAGCGGA 
TTGAATGCGG TCGACCTTGC GCGCTCACTT ATTCATGAAT TTGGTGGATT AAGAAGCTTA 
CTTTGCGCAC CAAAGCATCA GGTGTGTCGA CTTCCGGGCG TGGGACCTGT AAAATATGCC 
CAGCTTCAAG CCGCGGCTGA ATTAGCGAGG CGTGTGGCAC AAGAAAACCT GCAGAGAGGT 
CAGGTTTTGA CAAATCCCGA TTTAACTCGG GATTATTTAA TGAGACAATT AGCTGACCGC 
TCCTATGAAG TGTTCGCAAT TTTGCTGCTG GATAGCCAGC ATAGAGTGAT TCAGTTCGTC 
GAATTATTCC GCGGAACAAT AGATTCAGCT TCGGTGTATC CACGTGAAGT GGTGAGCCTA 
GTGCTGGAGA AAAAGGCTGC TGCCGTCATA GTGTGTCACA ATCATCCGTC TGGTATTGCC 
GAGCCCAGTC AGGCTGACAG ACGAATAACT GAGCGATTAA AAAATGCGTT AGCAACCATA 
GACGTATCCT TACTGGACCA TATGGTTGTT GGTGATCGAG AGATAGTTTC CTTCGCGGAA 
CGAGGCTGGA TTAATTAA 

 

Protein sequence

MAIKDWPEGE GPRDKLLVKG AAHLSDAELL AVLLRNGLSG LNAVDLARSL IHEFGGLRSL 
LCAPKHQVCR LPGVGPVKYA QLQAAAELAR RVAQENLQRG QVLTNPDLTR DYLMRQLADR 
SYEVFAILLL DSQHRVIQFV ELFRGTIDSA SVYPREVVSL VLEKKAAAVI VCHNHPSGIA 
EPSQADRRIT ERLKNALATI DVSLLDHMVV GDREIVSFAE RGWIN