Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0353 |
Symbol | pyrE |
ID | 4257056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 392829 |
End bp | 393476 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638120958 |
Product | orotate phosphoribosyltransferase |
Protein accession | YP_736413 |
Protein GI | 114045863 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0461] Orotate phosphoribosyltransferase |
TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.68295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGCCT ATCAACGTGA GTTTATTGAA TTTGCCCTAG AGCGTCAGGT ACTGCGATTC GGTGAGTTTA CCCTTAAATC GGGCCGTATC AGTCCTTATT TCTTTAATGC GGGTTTATTC AATACTGGAC GAGACCTTGC GCGTTTAGGA CGTTTTTATG CGGCGGCGTT AGTGGATTCA GGCATAGAGT ACGATCTGTT GTTTGGCCCT GCTTACAAAG GTATTCCGAT TGCGACCACG ACAGCGGTGG CCTTGTGCGA ACACCACGAT ATCGATGTTC CCTACTGCTT TAATCGTAAA GAGAAAAAAG ATCACGGTGA AGGCGGCAGC TTAGTCGGTA GCGAGCTTAA AGGTCGGGTG ATGCTGGTGG ACGATGTGAT CACCGCGGGT ACGGCGATTC GTGAGTCGAT GGAAATCATC GAGGCCCATC AGGCGCAGCT AGCAGGCGTA TTAATCGCGC TGGATAGACA AGAGAAAGGC AAGGGCGAAC TGTCGGCCAT CCAAGAGGTT GAGCGTGATT TTGGCTGCGG TATTGTGGCG ATCATCAAGC TTGCGGATTT GATCAGCTAT CTGTCAGAAA AACCGGGTAT GGAAGCGCAA CTGGCGGCGG TAAGCCAGTA CCGTGAGCAG TATGGCATCG AAGCCTAA
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Protein sequence | MKAYQREFIE FALERQVLRF GEFTLKSGRI SPYFFNAGLF NTGRDLARLG RFYAAALVDS GIEYDLLFGP AYKGIPIATT TAVALCEHHD IDVPYCFNRK EKKDHGEGGS LVGSELKGRV MLVDDVITAG TAIRESMEII EAHQAQLAGV LIALDRQEKG KGELSAIQEV ERDFGCGIVA IIKLADLISY LSEKPGMEAQ LAAVSQYREQ YGIEA
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