| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0330 |
|---|
| Symbol | gmk |
|---|
| ID | 4257016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 364731 |
|---|
| End bp | 365405 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638120936 |
|---|
| Product | guanylate kinase |
|---|
| Protein accession | YP_736391 |
|---|
| Protein GI | 114045841 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0194] Guanylate kinase |
|---|
| TIGRFAM ID | [TIGR03263] guanylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0351596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.331396 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGGCT TTCTGGGCCC TTCTTGCGTT AACCAACTGG ATATTTTGCT CATGACCGCA
CGCGGAAATT TATTTATTGT TTCAGCCCCG AGTGGTGCTG GTAAATCCTC GCTGATTTCG
GCGCTGCTGA AAGACAAACC CGCCGACATG CAGGTTTCAG TGTCGCACAC TACCCGTGCG
CCTCGCCCTG GCGAAGTGAA TGGTCAGCAC TACCATTTTG TTAATGTTGA AGAATTTAAA
GCACTGATCG AGCAAAATGC CTTTTTCGAG TGGGCCGAAG TGTTCGGTAA CTACTATGGC
ACTTCACGCC ACGTCATTGA GCACACTTTG ACTCAAGGTA TCGATGTTTT CCTCGATATC
GACTGGCAAG GCGCTCAGCA AGTCAAAGCC GTGATGCCAG AGGCCATTGG TGTATTTATT
CTACCGCCCT CAAGGGATGA GCTAGAACGT CGCCTCACTG GCCGTGGCCA AGACAGTCAG
GAAGTTATCG CCAGCCGTAT GGCACAGGCG GTTTCTGAAA TGTCGCACTA TAAAGAATAT
GATTTTATTA TCGTCAATGA CGATTTTGAC ACAGCACTGG CCGATCTGCG GGCGATCATT
CGCAGCCAAC GCTTAACGGG TGCTAGTCAG ATCCACGCGC AAAATGATAT GCTTAACGAT
CTGTTGGCAG GCTAA
|
|---|
| Protein sequence | MLGFLGPSCV NQLDILLMTA RGNLFIVSAP SGAGKSSLIS ALLKDKPADM QVSVSHTTRA
PRPGEVNGQH YHFVNVEEFK ALIEQNAFFE WAEVFGNYYG TSRHVIEHTL TQGIDVFLDI
DWQGAQQVKA VMPEAIGVFI LPPSRDELER RLTGRGQDSQ EVIASRMAQA VSEMSHYKEY
DFIIVNDDFD TALADLRAII RSQRLTGASQ IHAQNDMLND LLAG
|
|---|
| |