| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0328 |
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| Symbol | |
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| ID | 4257014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 362248 |
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| End bp | 364350 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638120934 |
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| Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
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| Protein accession | YP_736389 |
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| Protein GI | 114045839 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.499635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.39601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTATCTGT TTGAAGGTCT AAAGGAGTCT GCTTCCGGTT ACTTAGAACC TGAACAGGTA
GAATTGCTCA AGCAGGCGTA CCAAGTTGCG CGTGATGCCC ATGAAGGGCA AATGCGCACC
AGCGGCGAAC CTTATATTAC CCATCCGGTT GCGGTTGCCC GCATCCTCGC CGAGATGCGT
CTCGATCACG AGACGCTGAT GGCGGCCTTG CTGCACGACA CCATCGAAGA TACCTATGTC
ACCAAAGAGG ACTTGGCCGA ACAATTTGGC GAAGCCGTGG CAGAGTTGGT TGAAGGGGTG
TCTAAGCTCG ACAAGCTGAA ATTTCGCGAT AAAAAAGAAG CCCAAGCGGA AAACTTTCGC
AAAATGATGA TGGCGATGAC GCAGGATATC CGCGTTATTC TCATCAAGCT TGCCGACCGC
ACCCACAACA TGCGCACCTT AGGTGCGTTG CGCCCCGATA AACGCCGCCG CATTGCCCGC
GAAACCTTAG AGATTTACGC GCCGATTGCC AACCGACTCG GTATTCACAA TATCAAGACC
GAGTTAGAGG ATTTAGGCTT TCAAGCCTAT TATCCGATGC GCTATCGGGT GTTAAAGGAA
GTCGTCAAAG CCGCTCGTGG CAACCGTAAA GAACTCATTC AAGGCATTGA GGCTGCGGTA
TTAACTCGCC TAAACGATGC GGGCATTAAA GGCAAAGTCA AAGGTCGCGA GAAAAACCTC
TACTCCATCT ACAACAAGAT GCAGAGTAAG GAACTCCAGT TCCAAGAGGT GATGGATATC
TACGCCTTTC GTGTTATCGT CGACTCCATC GATACTTGCT ACCGCGTGCT CGGTGCCATG
CACGGCCTGT ATAAACCGCG TCCGGGTCGC TTTAAAGATT ATATTGCTAT CCCAAAAGCC
AACGGCTATC AGTCATTACA TACCTCGTTA TTCGGCCCCC ACGGCGTACC CGTCGAGATC
CAAATTCGTA CCGAAGATAT GGATCAAATG GCCGATAAAG GGGTTGCGGC CCACTGGGCT
TACAAAGGCG GTGCCGATGG TCAAGGCACC ACCACGCAAG TGCGTGCCCG CAAGTGGATG
CAAAGCTTGC TGGAACTGCA ACAGAGCGCC AGCACCTCCT TCGAATTCGT GGAAAACGTC
AAAACCGAAC TCTTCCCCGA AGAGATTTAC GTCTTTACCC CCGAAGGTCG CATTTTAGAA
TTACCGGTTA ACGCCACCGC CGTCGACTTT GCCTATGAAG TCCACACCGA TGTGGGCAAT
ACCTGTGTCG GCGCCCGCGT TAACCGCCAA GCTTATCCGT TAAGTCAGCC ATTAATCTCC
GGCCAAACCG TTGAGATCAT TACCGCTAAA GGCGCGCGTC CGAATGCCGC TTGGCTTAAC
TTTGTGGTCA CAGGTAAAGC ACGCGCCAAA ATCCGCCAAG TGCTCAAGAG CCTAAAAGCA
GACGATGCCA TTGCCCTTGG CCGCCGTTTG CTTAACCATG CGCTGGGTAA AACCAAGCTT
GATAGCATCC CTGCCGAGCA GATTGATAAA GTCGTGCGCG ATACTAAGCA CGCCAATTTA
AATTCCTTAC TCGCCGACAT CGGCCTTGGC AATGCCATGA GCATAGTTAT CGCCCAACGT
TTGATTGGCG ATAATTTAGA AAATCAAGAG AGCCGCGATT CCCACCTGAT GCCAATCCGT
GGCGCCGAAG GCATGTTAGT GACCTTCGCT AACTGCTGCC GCCCCATCCC AGGTGATGCG
GTGATTGCCC ACGTAAGCCA AGGTAAAGGC TTAGTCGTCC ACATGGAAAA CTGCGCTAAC
ATTCGCGGTT ACCAAGGCGA GCCAGATAAA TACATTCCCG TACAGTGGGA CAATGTCGAA
GGCGTCGAGT ATCAAGCCAA TCTGCGGGTG GAAATTGTTA ACCACCAGGG CGCGCTGGCG
AAGATCACCT CGATTATCGC CGCCGAGGGC TCGAACATTC ACAACCTTAG CACCGAAGAG
CGCGATGGCC GCGTTTACTT GATTAACCTG CGAATTTCGG TGAAGGACAG GATCCATTTA
GCTAACGTGA TGCGCCGTAT CCGGGTACTG CCCGAGGTGT TGCGTACATC CCGTAATCGT
TGA
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| Protein sequence | MYLFEGLKES ASGYLEPEQV ELLKQAYQVA RDAHEGQMRT SGEPYITHPV AVARILAEMR
LDHETLMAAL LHDTIEDTYV TKEDLAEQFG EAVAELVEGV SKLDKLKFRD KKEAQAENFR
KMMMAMTQDI RVILIKLADR THNMRTLGAL RPDKRRRIAR ETLEIYAPIA NRLGIHNIKT
ELEDLGFQAY YPMRYRVLKE VVKAARGNRK ELIQGIEAAV LTRLNDAGIK GKVKGREKNL
YSIYNKMQSK ELQFQEVMDI YAFRVIVDSI DTCYRVLGAM HGLYKPRPGR FKDYIAIPKA
NGYQSLHTSL FGPHGVPVEI QIRTEDMDQM ADKGVAAHWA YKGGADGQGT TTQVRARKWM
QSLLELQQSA STSFEFVENV KTELFPEEIY VFTPEGRILE LPVNATAVDF AYEVHTDVGN
TCVGARVNRQ AYPLSQPLIS GQTVEIITAK GARPNAAWLN FVVTGKARAK IRQVLKSLKA
DDAIALGRRL LNHALGKTKL DSIPAEQIDK VVRDTKHANL NSLLADIGLG NAMSIVIAQR
LIGDNLENQE SRDSHLMPIR GAEGMLVTFA NCCRPIPGDA VIAHVSQGKG LVVHMENCAN
IRGYQGEPDK YIPVQWDNVE GVEYQANLRV EIVNHQGALA KITSIIAAEG SNIHNLSTEE
RDGRVYLINL RISVKDRIHL ANVMRRIRVL PEVLRTSRNR
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