Gene Shewmr7_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0319 
Symbol 
ID4257005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp352034 
End bp352936 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content45% 
IMG OID638120925 
Productputative acyltransferase 
Protein accessionYP_736380 
Protein GI114045830 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACGC TGTTTTCACA ATTAAAAGGC TGCATTGCCT TCTTAGGTTA TGTGGTGAAC 
ACCTTGTTTT GGGTTATACC CATAGTGCTG GGCAGTTTGA TAAAGCTTAT CCCTCTGCCG
CCTTTGAGAA CGGCCATCAG TTACTTTCTC GACTTTTGCG CGAGCGCCTG GATAAGCGTC
AATGGTGTGA TTGAACGTGT GCTACACCCT GTAGAAATTG AACTCTCGGG TGAGACTCAA
TTCTCGACCA AAGAATGGTA TATGGTGATC GCTAACCATC AGTCTTGGGT GGATATTTTA
ATCCTACAAC GGGTGTTTAA TCGCCGTATT CCCTTCCTGA AGTTCTTCCT CAAACAGGAA
CTACTTTATG TACCAGTATT AGGATTGGCG TGGTGGGCAT TAGACTTTCC CTTTATGCGC
CGCTATAGCA CATCACAGCT GAAGAAAAAT CCGAAGCTCA AGGGCAAAGA TATTGAAATT
ACACGTAAAG CCTGCGCGAA ATTTAAAACT AAACCCGTGA GTGTGATGAA CTTTGTCGAA
GGTACGCGTT TTACTAAGGC CAAACATAAA AAACAAAACT CACAGTTCCA ACATTTGTTA
AAGCCTAAAG CGGGCGGCAT GGCCTTCGCG CTATCTGCGA TGGGAGAACA GATCCACAAG
TTAGTGGATG TCGCAATATA CTACCCGGGC CCTGTCCCGA GCTTTTGGGA CTACCTGACA
GGTAAGCTGC CAAAGGTTAA AGTACACATT AAAGTGACCG ATATTGCGCC AGGCATGCGT
GGCGACTATA TGAACGATCG TGATTTCAAA ATTGGCTTCC AAGAACAATT GAACGAACTT
TGGCTCGCTA AGGATCAAGT GATCAGCCAA CTGGCTGGAC AAGCGGATCA AGAAGTAAGG
TAA
 
Protein sequence
MGTLFSQLKG CIAFLGYVVN TLFWVIPIVL GSLIKLIPLP PLRTAISYFL DFCASAWISV 
NGVIERVLHP VEIELSGETQ FSTKEWYMVI ANHQSWVDIL ILQRVFNRRI PFLKFFLKQE
LLYVPVLGLA WWALDFPFMR RYSTSQLKKN PKLKGKDIEI TRKACAKFKT KPVSVMNFVE
GTRFTKAKHK KQNSQFQHLL KPKAGGMAFA LSAMGEQIHK LVDVAIYYPG PVPSFWDYLT
GKLPKVKVHI KVTDIAPGMR GDYMNDRDFK IGFQEQLNEL WLAKDQVISQ LAGQADQEVR