Gene Shewmr7_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0227 
Symbol 
ID4255688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp242945 
End bp243244 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content44% 
IMG OID638120831 
Productcytochrome c, class I 
Protein accessionYP_736289 
Protein GI114045739 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.495989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00493696 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAC TGTTAGCAAT GACTGCAGTC GCTGCTTTGA CTATGTCAGT CAACGTTTCA 
GCTCAAGATG CTGAAGCTAT TTTCAACAAG GCATGTACCG TATGCCACAG TATGGGTGTT
GCTGGTGCTC CAAAGGCGCA CAATGCTGCT GAGTGGGAAC CACGCTTAGC AAAAGGTATG
GACACTCTGT TACACAGTGT GAAAACAGGT TTAAACGCAA TGCCACCAGG TGGTATGTGT
ACTGATTGTA CTGACGAAGA TTACAAAGCA GCTATCGAGT TTATGTCTAA AGCTCAGTAA
 
Protein sequence
MKKLLAMTAV AALTMSVNVS AQDAEAIFNK ACTVCHSMGV AGAPKAHNAA EWEPRLAKGM 
DTLLHSVKTG LNAMPPGGMC TDCTDEDYKA AIEFMSKAQ