| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0211 |
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| Symbol | rpsE |
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| ID | 4255673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 233065 |
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| End bp | 233568 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638120816 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_736274 |
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| Protein GI | 114045724 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0010203 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00711343 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTAAAT TAGAAGCTCA GCAAAAAGAC GATCTGCAAG AGAAATTGAT TGCAGTTAAT
CGTGTTTCTA AAGTAGTTAA GGGCGGTCGT ATCTTTAGCT TCACAGCACT AACAGTAGTG
GGTGATGGTA ATGGTAAGGT CGGCTATGGC TATGGTAAAG CGCGCGAAGT TCCAGCAGCG
ATTCAAAAAG CTATGGAAAA AGCCCGTCGT AACATGGTGA CCGTTGAGTT GAATGCAGGT
ACTCTGCATC ACCCAGTTAA AGGTCGTCAT ACTGGTTCAC GTGTATACAT GCAACCAGCA
TCACAGGGTA CCGGTATTAT CGCCGGTGGC GCAATGCGTG CCGTATTGGA AGTAGCAGGC
GTTCATAACG TTCTGTCAAA AGCATACGGT TCAACTAACC CGATCAACAT CGTTCGCGCG
ACTGTAGATG CTCTGGTGCA CATGAAGTCA CCTTCGCAAA TCGCAGCTAA GCGTGGCCTG
AATGTTGACG AAATTCGGGG GTAA
|
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| Protein sequence | MAKLEAQQKD DLQEKLIAVN RVSKVVKGGR IFSFTALTVV GDGNGKVGYG YGKAREVPAA
IQKAMEKARR NMVTVELNAG TLHHPVKGRH TGSRVYMQPA SQGTGIIAGG AMRAVLEVAG
VHNVLSKAYG STNPINIVRA TVDALVHMKS PSQIAAKRGL NVDEIRG
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