| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0196 |
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| Symbol | rplW |
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| ID | 4255324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 226639 |
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| End bp | 226944 |
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| Gene Length | 306 bp |
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| Protein Length | 101 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638120801 |
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| Product | 50S ribosomal protein L23 |
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| Protein accession | YP_736259 |
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| Protein GI | 114045709 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0089] Ribosomal protein L23 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000848979 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000284829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGATGATCC GCGAAGAACG TTTGCTAAAA GTAATTCTAG CACCTCACAT CTCTGAAAAG
AGCACTGTGA ATGCTGAGAA GCACAACACT GTTGTTTTCC GCGTAGCTAT CGATGCAACT
AAAGCTGAAA TTAAAGCTGC TGTTGCCAAG CTATTTGAAG TTGAAGTCGA ATCAGTTCGC
ACTTTAGTGA GCAAAGGCAA AACTAAACGC ACTGGTGGCC GTGTTGGTCG TCGTAGCGAT
TGGAAAAAAG CCTACGTGAC TTTAGCTGCT GGTGCTGACA TCGATTTCGT CGGCGGCGCT
GAGTAA
|
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| Protein sequence | MMIREERLLK VILAPHISEK STVNAEKHNT VVFRVAIDAT KAEIKAAVAK LFEVEVESVR
TLVSKGKTKR TGGRVGRRSD WKKAYVTLAA GADIDFVGGA E
|
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