Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0174 |
Symbol | |
ID | 4257562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 195530 |
End bp | 196348 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638120770 |
Product | glutamate racemase |
Protein accession | YP_736237 |
Protein GI | 114045687 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000222817 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0305567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCGCAAC CAATATTAGT ATTCGATTCT GGCATCGGCG GTCTATCCGT ATTGGCTGAA ATTCGTAAAC TGCTCCCCCA TCACAATTAC TGCTATTTAT TCGATAATGC CAGATTGCCC TATGGCGAAT TGGAAGAGCA GGAACTTATC TCGGGTTGTG TTGCGCTCAT CGACCAAGTC GTCGAGCGTA CCCACGCCGC CATTGTTGTC GTAGCTTGCA ATACCGCGAG TACTGTTGTG CTGCCCGCGC TGCGTGCCAC TTTATCTATT CCTGTGGTGG GCGTTGTCCC CGCCATTAAA CCCGCGGCGC AGTTATCTAA AAGTAAGCGT ATCGGTTTGC TTGCCACTCC TGGTACGGTC AAGCGTCACT ATACCTACGA ACTCATCAGC CAATTTGCCG ATGATTGTCA CGTTGAGCTG TTCGGATCTT CCGAATTAGT GCTGATGGCC GAACAGAAGA TTGCCACTGG CCAATTAGAT ATGGCACGGT TAGCACAGGT GCTATCGCCC ATCGTCGAAG CGGACTTAGA TGTACTGGTG CTTGGATGTA CTCACTTCCC CATGCTGCGT GATGAACTGC AACAGGTATT AGGCAAAGGT GTCACCTTGC TCGATTCTGG AGAGGCCATT GCCAAGCGAG TCAAAACCTT ATTGGCTGAG ACTAAGAGTG AGCAGCAAGT TCAAGAGGAC GCAAATCGAG ATTCGGTTAT GCAGGCGTTT TATACTAAAG CGGAAATCAG TGAGGGATTG GCGAGTATGT TAGTCGATTG TGGCTTTTCG ACCCTAGAGC GAATCACCAC AATCAACTCG AACAGATAA
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Protein sequence | MSQPILVFDS GIGGLSVLAE IRKLLPHHNY CYLFDNARLP YGELEEQELI SGCVALIDQV VERTHAAIVV VACNTASTVV LPALRATLSI PVVGVVPAIK PAAQLSKSKR IGLLATPGTV KRHYTYELIS QFADDCHVEL FGSSELVLMA EQKIATGQLD MARLAQVLSP IVEADLDVLV LGCTHFPMLR DELQQVLGKG VTLLDSGEAI AKRVKTLLAE TKSEQQVQED ANRDSVMQAF YTKAEISEGL ASMLVDCGFS TLERITTINS NR
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