Gene Shewmr7_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0174 
Symbol 
ID4257562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp195530 
End bp196348 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content49% 
IMG OID638120770 
Productglutamate racemase 
Protein accessionYP_736237 
Protein GI114045687 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000222817 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0305567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCAAC CAATATTAGT ATTCGATTCT GGCATCGGCG GTCTATCCGT ATTGGCTGAA 
ATTCGTAAAC TGCTCCCCCA TCACAATTAC TGCTATTTAT TCGATAATGC CAGATTGCCC
TATGGCGAAT TGGAAGAGCA GGAACTTATC TCGGGTTGTG TTGCGCTCAT CGACCAAGTC
GTCGAGCGTA CCCACGCCGC CATTGTTGTC GTAGCTTGCA ATACCGCGAG TACTGTTGTG
CTGCCCGCGC TGCGTGCCAC TTTATCTATT CCTGTGGTGG GCGTTGTCCC CGCCATTAAA
CCCGCGGCGC AGTTATCTAA AAGTAAGCGT ATCGGTTTGC TTGCCACTCC TGGTACGGTC
AAGCGTCACT ATACCTACGA ACTCATCAGC CAATTTGCCG ATGATTGTCA CGTTGAGCTG
TTCGGATCTT CCGAATTAGT GCTGATGGCC GAACAGAAGA TTGCCACTGG CCAATTAGAT
ATGGCACGGT TAGCACAGGT GCTATCGCCC ATCGTCGAAG CGGACTTAGA TGTACTGGTG
CTTGGATGTA CTCACTTCCC CATGCTGCGT GATGAACTGC AACAGGTATT AGGCAAAGGT
GTCACCTTGC TCGATTCTGG AGAGGCCATT GCCAAGCGAG TCAAAACCTT ATTGGCTGAG
ACTAAGAGTG AGCAGCAAGT TCAAGAGGAC GCAAATCGAG ATTCGGTTAT GCAGGCGTTT
TATACTAAAG CGGAAATCAG TGAGGGATTG GCGAGTATGT TAGTCGATTG TGGCTTTTCG
ACCCTAGAGC GAATCACCAC AATCAACTCG AACAGATAA
 
Protein sequence
MSQPILVFDS GIGGLSVLAE IRKLLPHHNY CYLFDNARLP YGELEEQELI SGCVALIDQV 
VERTHAAIVV VACNTASTVV LPALRATLSI PVVGVVPAIK PAAQLSKSKR IGLLATPGTV
KRHYTYELIS QFADDCHVEL FGSSELVLMA EQKIATGQLD MARLAQVLSP IVEADLDVLV
LGCTHFPMLR DELQQVLGKG VTLLDSGEAI AKRVKTLLAE TKSEQQVQED ANRDSVMQAF
YTKAEISEGL ASMLVDCGFS TLERITTINS NR