| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0173 |
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| Symbol | |
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| ID | 4257561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 194291 |
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| End bp | 195388 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638120769 |
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| Product | tRNA (uracil-5-)-methyltransferase |
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| Protein accession | YP_736236 |
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| Protein GI | 114045686 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00257971 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0325105 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTAG CAGCAATGGA TCCCACGACC TATGATGCGC AACTAACGGC AAAGCGTATC
AAGCTAGAGC AGGCCTTTGC CCAATTTGAG ACACCGAGTG TTGAAGTGTT TGCCTCAGAA
CCTGCCCACT ATCGGATGCG TGCCGAGTTT CGCGTATGGC ACGAGGGCGA CGATTTATAC
TATTACATGT TCGATAAAGT ATTGAACGAC AAAGTTCGTT GCGACCAATA CTTACCCGCG
AGCGCCTTAA TCAATCAGAT GATGGCAGCA CTGATCGCCG AGTTAAAACC GAACCACAGC
CTACGCCATA AACTCTTCCA GGTTGATTTT TTATCAACGC TCAGTGGTGA GATTTTAGTG
TCACTGCTGT ATCACAGACA GCTTGATGAC CAATGGCGCA GCGAAGCCGC CGCACTTAAA
GCCAGATTGA GCAGCCAATT TAAGGTCAAC ATCATTGGCC GTGCGCGCAA ACAGAAAATC
GATTTAGATA AAGACTTTGT GGTTGAGTCA CTGCAAGTGA ATGACAAAGT TTTCCATTAC
AAACAAATCG AAAACAGCTT TACCCAGCCA AATGCCAAGG TGGCAATCAA GATGCTGGAA
TGGGCTATCG ACGTGACTCA AAATAGCCAA GGCGATTTAC TGGAGCTTTA TTGTGGTAAT
GGCAACTTCT CCATCGCACT GGCACAAAAC TTTAATCGCG TGCTCGCGAC CGAGTTGGCT
AAACCTTCAG TCGATGCAGC CCAGTACAAT ATCGAAGTCA ACAATATCGA TAATCTGCAG
ATTATCCGTA TGTCGGCGGA AGAATTTAGC GATGCGATGG CTAAAAAACG CAGTTTTAGA
CGCTTAGAAG GCATAGATCT GGATAGCTAT GTCTGCAACA CCATTTTTGT CGACCCTCCA
CGAGCAGGTA TCGACCCTGC CACGTTAGAG TTAGTGCAAG GTTATGAGCG GATCCTGTAT
ATCTCTTGTA ATCCCGACAC CTTGAAAGAC AATTTGCAGC AATTAAATCA GACCCATAAA
GTCACCCGTT TTGCCCTGTT TGATCAGTTC CCTTATACCG ATCATATGGA AACAGGTGTA
CTGCTTGAGC GTCGTTAA
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| Protein sequence | MNLAAMDPTT YDAQLTAKRI KLEQAFAQFE TPSVEVFASE PAHYRMRAEF RVWHEGDDLY
YYMFDKVLND KVRCDQYLPA SALINQMMAA LIAELKPNHS LRHKLFQVDF LSTLSGEILV
SLLYHRQLDD QWRSEAAALK ARLSSQFKVN IIGRARKQKI DLDKDFVVES LQVNDKVFHY
KQIENSFTQP NAKVAIKMLE WAIDVTQNSQ GDLLELYCGN GNFSIALAQN FNRVLATELA
KPSVDAAQYN IEVNNIDNLQ IIRMSAEEFS DAMAKKRSFR RLEGIDLDSY VCNTIFVDPP
RAGIDPATLE LVQGYERILY ISCNPDTLKD NLQQLNQTHK VTRFALFDQF PYTDHMETGV
LLERR
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