| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0170 |
|---|
| Symbol | |
|---|
| ID | 4257558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 191202 |
|---|
| End bp | 192260 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638120766 |
|---|
| Product | selenophosphate synthetase |
|---|
| Protein accession | YP_736233 |
|---|
| Protein GI | 114045683 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0709] Selenophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00476] selenium donor protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0263017 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAATT CCGCTGTATC TTCCGCCGAT AGCATTAAAC TCACAGAATA TAGCCATGGT
GCCGGCTGCG GCTGTAAGAT TTCTCCTAAA GTACTGACCA CTATCCTTGC CTCACAACTG
CCTGTCTTTA CCGATCCTAA CCTGTTGGTC GGCAATCAGA GTCGTGATGA TGCAGCCGTT
TATAAGCTCA ATGATGAAAT CGGCATTATC AGTACCACCG ACTTCTTTAT GCCCATTGTG
GATGATCCCT TTACCTTTGG CCGTATCGCT GCCACCAATG CCATTAGCGA TATCTATGCC
ATGGGTGGCA CGCCCATGAT GGCGATTGCG ATTTTAGGCT GGCCAGTGAA CAAACTCCCC
GCCGAGATCG CGCAACAAGT GGTTGATGGT GGCCGCCAAG CCTGTATGGA AGCTGGGATA
ATGCTGGCCG GTGGTCATAG TATCGATGCG CCTGAGCCAA TCTTTGGCCT TGCGGTCACA
GGGCAAATCG CCCTTACGGA TTTAAAACAA AACGATACCG CAAAAGCGGG CGATCGCTTG
TATCTCACTA AACCTATCGG AATTGGCATT CTCACTACGG CACAAAAGCA GAAGAAGCTC
AAAGATGAAG ATAGCCAAAT TGCAGTCAAT GCCATGTGCC AGCTCAATAG CATAGGCGCC
AAAATCGCAA AGATTACAGG CGTGAACGCC CTCACCGATG TCACAGGTTT TGGGCTTGCG
GGCCACCTAC TGGAAGTATG CCAAGGCGCT AAACTCACCG CTAAACTTGA CCTCGATTCG
GTACCACTCT TGCCGCGCGC CCTCGACTAT CTAGCGCAAG GCTGTATACC CGGTGGCACC
CATCGTAACT ACGACAGTTA TGGCGAACAC TTGCCCGCAC TTACCGATCA TCAAAAAGCC
ATTTTGTGTG ACCCACAAAC CAGTGGCGGC TTGTTAGTGG CGGTGTCGAG TGAGGCCGAA
GCGGAACTGG TGGCACTGCT GAATGCCCAT CAGATTGAGC CTATCTGCAT TGGTTCGCTA
GAAACGCCCA CCTCCACCGC CAATGTGGTG CTGTGTTAA
|
|---|
| Protein sequence | MSNSAVSSAD SIKLTEYSHG AGCGCKISPK VLTTILASQL PVFTDPNLLV GNQSRDDAAV
YKLNDEIGII STTDFFMPIV DDPFTFGRIA ATNAISDIYA MGGTPMMAIA ILGWPVNKLP
AEIAQQVVDG GRQACMEAGI MLAGGHSIDA PEPIFGLAVT GQIALTDLKQ NDTAKAGDRL
YLTKPIGIGI LTTAQKQKKL KDEDSQIAVN AMCQLNSIGA KIAKITGVNA LTDVTGFGLA
GHLLEVCQGA KLTAKLDLDS VPLLPRALDY LAQGCIPGGT HRNYDSYGEH LPALTDHQKA
ILCDPQTSGG LLVAVSSEAE AELVALLNAH QIEPICIGSL ETPTSTANVV LC
|
|---|
| |