Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0168 |
Symbol | |
ID | 4257556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 188178 |
End bp | 190040 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638120764 |
Product | phospholipid/glycerol acyltransferase |
Protein accession | YP_736231 |
Protein GI | 114045681 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0819897 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTAA CAAGACGTTT TTTACCGTAT TTTGCTACCC AATGCCTTGG GGCACTTAAC GACAATATCT ATAAAAATGT GTTGTTACTG CTGATTACCT TCAGCCAAGT CAACGATTTA CCTATTAGTG TCGACATGTT TGTCAATTTG GCGGCGGGGG TCTTTATCCT GCCGTTTTTC CTATTTTCGG CCCATGCAGG CGTGGTGGCA GACAATATGG ATAAGGCCAA ACTTATCCGT CGCTTAAAAC TGCTCGAAGT CATCATTATG TTCAGCGCCG CTGCGGCCAT CGTGAGCGAA AATTATATGA TGATGTTATT ACTGCTGTTT TTAACCGGTA GTCAGTCAGC TTATTTTGGC CCGGTCAAAT ATTCCCTATT ACCTCAAGCC TTAAAAGAGG ATGAGTTAGT GACGGGCAAT GCCTGGGTTG AGATGGGGAC GTTTTTGTCT ATCTTGATTG GTACCTTGAG TGCCGGGATT TTAGTATCTG AAAACAATGC CACCCTATGG TCGGCCATCA CGGTCGCGAG CCTTGCCTTG GCGGGGTATT TATCTAGCCG CGCGATCCCT GCTTTACCGC CGCAGGGCAC GGTACAGAAA ATCCAATTTC GCCCATTATC AGGCACTTGG CGCACCATAA AGAAGGCACG CCAAACGCCT TCGATTTGGA TGGCCATCCT CGCCATTAGC TGGTTCTGGT TCTTGGGGGC CACATATCTG ACCCAATTCC CTAACTTTGC CAAGTTGCAT TTGCACTCTG GTGCGACCGT GGTGTCGCTG CTGCTGGGGA TGTTCTCTAT CGGGATTGCG GTGGGCTCCT TTGTCTGTGA GCGTTTTTCC TTTGGCCATG TGGAGTTAGG CTTGCTGCCC TTTGGGGTGC TTGGGTTAAC TGTGTTTGGT GTGGACTTGC TTTGGGCGAT TCCTCCCGCA CCTGCGGATG CGCAGTTTGT CTATGGCTTA CAGACCTTTA TTGCCGAGCC GAAGCATTAT CGAGTGATGC TGGACTTCTT CATGATTGGT GTCAGCGGTG GTCTGTTTAT CGTGCCTCTG TACGCCTTTA TCCAAGCACG CTCCGCTAAG GGAGAATGTG CGCAAGCGAT TGCCGCGAAT AACATTATGA ACTCGCTGTT TATGGTGGCG TCGGCGTTGT TGTCTATGCT GTTACTCGGG GGGGCTGGCT GGAGTATTCC ACAGTTATTC TTACTGCTGG CGGTGATGAA CTTCGTGGTT GCGCTTTACG TGTATTCGCA AGTGCCTGAG TTTACCCAAC GATTTATCAG TTACTTACTC AGCCATGTGA TGTATCGGGT GACTGTGACT GGGCGAGAAA AGATCCCTAA GGAAGGTGCA GGGATTATCG TCTGTAACCA TGTAAGCTAT GTGGATGCAT TGATCATTAT GGGCGCGTCG ACCCGGCCGA TTCGTTTCGT GATGGATAAA TCCATCAGTG AAATCCCTGT GCTGAAATAC CTGTTCCGCC ATGCTGGGGT GATCCCGATT TGTTCGCCGC GCCAGAGTGA GGCGACTTAC AATCAAGCTT TTGAATCGAT TCATGAGGCG TTAGCGAATG GCGAGTTGGT GTGTATCTTC CCCGAAGGCC GCTTAACACC CGATGGTGAA CTTGGCGAGT TCCGTCCCGG TATCGATAAA ATCTTGGCCC GCGATCCAGT GCCCGTGATC CCTATGGCGC TCAATGGCCT GTGGGGTTCT TACTTTAGTC ATAAGGATGG CCATGCATTG ACCACACTGC CGAAACGCTT TTGGTCCAAG GTATCGGTGA GCTTAACGGA TGTGGTGGAT GGGCAAAATG CGGATCGGCA CTCGTTAAGG GATAGAGTCG CCGAGCTGCT TAATAACGCT TAA
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Protein sequence | MLLTRRFLPY FATQCLGALN DNIYKNVLLL LITFSQVNDL PISVDMFVNL AAGVFILPFF LFSAHAGVVA DNMDKAKLIR RLKLLEVIIM FSAAAAIVSE NYMMMLLLLF LTGSQSAYFG PVKYSLLPQA LKEDELVTGN AWVEMGTFLS ILIGTLSAGI LVSENNATLW SAITVASLAL AGYLSSRAIP ALPPQGTVQK IQFRPLSGTW RTIKKARQTP SIWMAILAIS WFWFLGATYL TQFPNFAKLH LHSGATVVSL LLGMFSIGIA VGSFVCERFS FGHVELGLLP FGVLGLTVFG VDLLWAIPPA PADAQFVYGL QTFIAEPKHY RVMLDFFMIG VSGGLFIVPL YAFIQARSAK GECAQAIAAN NIMNSLFMVA SALLSMLLLG GAGWSIPQLF LLLAVMNFVV ALYVYSQVPE FTQRFISYLL SHVMYRVTVT GREKIPKEGA GIIVCNHVSY VDALIIMGAS TRPIRFVMDK SISEIPVLKY LFRHAGVIPI CSPRQSEATY NQAFESIHEA LANGELVCIF PEGRLTPDGE LGEFRPGIDK ILARDPVPVI PMALNGLWGS YFSHKDGHAL TTLPKRFWSK VSVSLTDVVD GQNADRHSLR DRVAELLNNA
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