Gene Shewmr7_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0168 
Symbol 
ID4257556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp188178 
End bp190040 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content50% 
IMG OID638120764 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_736231 
Protein GI114045681 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0819897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTAA CAAGACGTTT TTTACCGTAT TTTGCTACCC AATGCCTTGG GGCACTTAAC 
GACAATATCT ATAAAAATGT GTTGTTACTG CTGATTACCT TCAGCCAAGT CAACGATTTA
CCTATTAGTG TCGACATGTT TGTCAATTTG GCGGCGGGGG TCTTTATCCT GCCGTTTTTC
CTATTTTCGG CCCATGCAGG CGTGGTGGCA GACAATATGG ATAAGGCCAA ACTTATCCGT
CGCTTAAAAC TGCTCGAAGT CATCATTATG TTCAGCGCCG CTGCGGCCAT CGTGAGCGAA
AATTATATGA TGATGTTATT ACTGCTGTTT TTAACCGGTA GTCAGTCAGC TTATTTTGGC
CCGGTCAAAT ATTCCCTATT ACCTCAAGCC TTAAAAGAGG ATGAGTTAGT GACGGGCAAT
GCCTGGGTTG AGATGGGGAC GTTTTTGTCT ATCTTGATTG GTACCTTGAG TGCCGGGATT
TTAGTATCTG AAAACAATGC CACCCTATGG TCGGCCATCA CGGTCGCGAG CCTTGCCTTG
GCGGGGTATT TATCTAGCCG CGCGATCCCT GCTTTACCGC CGCAGGGCAC GGTACAGAAA
ATCCAATTTC GCCCATTATC AGGCACTTGG CGCACCATAA AGAAGGCACG CCAAACGCCT
TCGATTTGGA TGGCCATCCT CGCCATTAGC TGGTTCTGGT TCTTGGGGGC CACATATCTG
ACCCAATTCC CTAACTTTGC CAAGTTGCAT TTGCACTCTG GTGCGACCGT GGTGTCGCTG
CTGCTGGGGA TGTTCTCTAT CGGGATTGCG GTGGGCTCCT TTGTCTGTGA GCGTTTTTCC
TTTGGCCATG TGGAGTTAGG CTTGCTGCCC TTTGGGGTGC TTGGGTTAAC TGTGTTTGGT
GTGGACTTGC TTTGGGCGAT TCCTCCCGCA CCTGCGGATG CGCAGTTTGT CTATGGCTTA
CAGACCTTTA TTGCCGAGCC GAAGCATTAT CGAGTGATGC TGGACTTCTT CATGATTGGT
GTCAGCGGTG GTCTGTTTAT CGTGCCTCTG TACGCCTTTA TCCAAGCACG CTCCGCTAAG
GGAGAATGTG CGCAAGCGAT TGCCGCGAAT AACATTATGA ACTCGCTGTT TATGGTGGCG
TCGGCGTTGT TGTCTATGCT GTTACTCGGG GGGGCTGGCT GGAGTATTCC ACAGTTATTC
TTACTGCTGG CGGTGATGAA CTTCGTGGTT GCGCTTTACG TGTATTCGCA AGTGCCTGAG
TTTACCCAAC GATTTATCAG TTACTTACTC AGCCATGTGA TGTATCGGGT GACTGTGACT
GGGCGAGAAA AGATCCCTAA GGAAGGTGCA GGGATTATCG TCTGTAACCA TGTAAGCTAT
GTGGATGCAT TGATCATTAT GGGCGCGTCG ACCCGGCCGA TTCGTTTCGT GATGGATAAA
TCCATCAGTG AAATCCCTGT GCTGAAATAC CTGTTCCGCC ATGCTGGGGT GATCCCGATT
TGTTCGCCGC GCCAGAGTGA GGCGACTTAC AATCAAGCTT TTGAATCGAT TCATGAGGCG
TTAGCGAATG GCGAGTTGGT GTGTATCTTC CCCGAAGGCC GCTTAACACC CGATGGTGAA
CTTGGCGAGT TCCGTCCCGG TATCGATAAA ATCTTGGCCC GCGATCCAGT GCCCGTGATC
CCTATGGCGC TCAATGGCCT GTGGGGTTCT TACTTTAGTC ATAAGGATGG CCATGCATTG
ACCACACTGC CGAAACGCTT TTGGTCCAAG GTATCGGTGA GCTTAACGGA TGTGGTGGAT
GGGCAAAATG CGGATCGGCA CTCGTTAAGG GATAGAGTCG CCGAGCTGCT TAATAACGCT
TAA
 
Protein sequence
MLLTRRFLPY FATQCLGALN DNIYKNVLLL LITFSQVNDL PISVDMFVNL AAGVFILPFF 
LFSAHAGVVA DNMDKAKLIR RLKLLEVIIM FSAAAAIVSE NYMMMLLLLF LTGSQSAYFG
PVKYSLLPQA LKEDELVTGN AWVEMGTFLS ILIGTLSAGI LVSENNATLW SAITVASLAL
AGYLSSRAIP ALPPQGTVQK IQFRPLSGTW RTIKKARQTP SIWMAILAIS WFWFLGATYL
TQFPNFAKLH LHSGATVVSL LLGMFSIGIA VGSFVCERFS FGHVELGLLP FGVLGLTVFG
VDLLWAIPPA PADAQFVYGL QTFIAEPKHY RVMLDFFMIG VSGGLFIVPL YAFIQARSAK
GECAQAIAAN NIMNSLFMVA SALLSMLLLG GAGWSIPQLF LLLAVMNFVV ALYVYSQVPE
FTQRFISYLL SHVMYRVTVT GREKIPKEGA GIIVCNHVSY VDALIIMGAS TRPIRFVMDK
SISEIPVLKY LFRHAGVIPI CSPRQSEATY NQAFESIHEA LANGELVCIF PEGRLTPDGE
LGEFRPGIDK ILARDPVPVI PMALNGLWGS YFSHKDGHAL TTLPKRFWSK VSVSLTDVVD
GQNADRHSLR DRVAELLNNA