| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0146 |
|---|
| Symbol | |
|---|
| ID | 4257062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 167205 |
|---|
| End bp | 168764 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638120742 |
|---|
| Product | AbgT putative transporter |
|---|
| Protein accession | YP_736209 |
|---|
| Protein GI | 114045659 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2978] Putative p-aminobenzoyl-glutamate transporter |
|---|
| TIGRFAM ID | [TIGR00819] p-Aminobenzoyl-glutamate transporter family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACC ATAAACCTGT CACTGGATTC CAGCGATTTC TCAATGGCGT CGAAGTCGTC
GGCAATAAAC TGCCCGATCC GGCGGTGTTA TTTGCGATGT TTCTGGGCCT AGTCTGGCTG
ATCTCTTGGG GATTATCGGG TGTCAGTTTT GATGAAATCG ACCCTCGTAC TGGCAACCCC
ATTCAAGTCG TGAATATGCT CGAAGGCGGC GCACTGACTG CATTTACCTC GAACATAGTC
TCCACCTTTG TGACTTTTCC ACCGCTCGGT GTCGTGCTGG TTGCCATGCT GGGTCTTGGC
GTGGCTGAAC ATACTGGCTT TATTAATGCT GGCCTGCGCT CGATTTTATC TGTGACCCCC
AAGATGTTAC TCACCCCGGT ATTGATCGCC GTAGGTATCC TCAGCCATGT CGCGGTTGAT
GCGGGTTATG TACTGGTTAT CCCGCTCGGC GCGGTGATCT TCTATGCCGC GGGTCGTCAT
CCCCTAGCCG GTATTGCCGC CGCTTTTGCT GGCGTATCCG GCGGTTTTTC TGCAACAGTG
GGTGTGCCAT CGAGCCTTGA CCCTATGTTA GCAGGCTTAA CTCAGGCAGC AGCAAGATTA
TCGGCCGACC CAGCGGCCGC CACATTAACA ATTAACCCAC TGAATAATAT CTTCTTTACG
TCGGCTTCAG CCGTATTAAT TATCTTAGTT GGCTGGTTCT TAACGGATAA AGTGATTGAG
CCACGCCTAA AAAGTACCGC GGTGAATGGC GATCCCAGCA CGCTGCCAAC GCTTGATGAG
CTGGCGCTCC ATGAGCGCCG TGGTCTCAAA TTCGCCATGG GCGCCATGTT GTTATGTGCC
TTAGGGCTGG TGTTTACCGC CTATGGTGAC AACTCTGCCT GGCGTGGTAC CGATGGCGCG
CTGACCAGTG CCTCGGCTCC CTTAATGCGC TCCATTGTGG CGATTATTTT TGTATTCTTC
CTCGTGCCAG GCATAGTCTA TGGCTATGTT GCGGGCACGG CGAATAACCA TAGAGCCATT
ATTCAAGGCA TGAGTAAGTC CATGAGCGGC ATGGGTTATT ATATTGTCAT GGCCTTCTTC
TGCGCTCAGT TTATTTATGC CTTTGGTCAA TCCAATTTAG GCGCATTAAT GGCAATTAAA
GGCGCGTTGG CGTTGAAAGA ATTGGCCCTT CCTATGGGCG TAACATTAGT CGGGATTGTG
TTTCTCACCG CGTTCGTCAA TCTATTAGTC GGCTCGGCAT CGGCCAAATG GGCCTTGATT
GGTGCCATTA TGGTGCCGAT GTTAATGGAG TTGGGTGTAT CGCCCGATCT GACTCAAGCC
GCTTATCGCG TTGGCGACTC GTCGACCAAT ATCATTACCC CGCTGATGCC TTACTTTCCG
TTGATTGTGG TGTTTTGCCA AAAATACGTT AAGGAATCAG GCATTGGCAC CTTAGTGGCG
CTGATGTTGC CGTTTTCAAT CAGTTTTCTG CTGCTTTGGA GCGGTTTCTT ACTCGCTTAC
TGGGCCTTAG GTCTGCCATT AGGAATTGGC AGTTCACTCT CCTTCCCGGC ACTATCTTAG
|
|---|
| Protein sequence | MENHKPVTGF QRFLNGVEVV GNKLPDPAVL FAMFLGLVWL ISWGLSGVSF DEIDPRTGNP
IQVVNMLEGG ALTAFTSNIV STFVTFPPLG VVLVAMLGLG VAEHTGFINA GLRSILSVTP
KMLLTPVLIA VGILSHVAVD AGYVLVIPLG AVIFYAAGRH PLAGIAAAFA GVSGGFSATV
GVPSSLDPML AGLTQAAARL SADPAAATLT INPLNNIFFT SASAVLIILV GWFLTDKVIE
PRLKSTAVNG DPSTLPTLDE LALHERRGLK FAMGAMLLCA LGLVFTAYGD NSAWRGTDGA
LTSASAPLMR SIVAIIFVFF LVPGIVYGYV AGTANNHRAI IQGMSKSMSG MGYYIVMAFF
CAQFIYAFGQ SNLGALMAIK GALALKELAL PMGVTLVGIV FLTAFVNLLV GSASAKWALI
GAIMVPMLME LGVSPDLTQA AYRVGDSSTN IITPLMPYFP LIVVFCQKYV KESGIGTLVA
LMLPFSISFL LLWSGFLLAY WALGLPLGIG SSLSFPALS
|
|---|
| |