Gene Shewmr7_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0136 
Symbol 
ID4257034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp154753 
End bp155226 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content49% 
IMG OID638120732 
ProductCMP/dCMP deaminase, zinc-binding protein 
Protein accessionYP_736199 
Protein GI114045649 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTAATC ACTTTTTACC TGCGGTTAAC CACACCTTGG CGTTGGCGCA AAAGGAAGTC 
GAAGGTACAG GCCTGCCGTT TTCTGCTGTG ATTGTGGATG AGTCTGGGCG GATTGTGGCT
GAAGGGGTGA ATCGGGTGCA GGCGCTGCAT GATTGTACCG CCCATGCTGA AATCCAAGCG
ATACGAATGG CGACTCTGCT ACTTAAACAA GTCAGCTTGG AGGGCATGAC ATTAATCGCT
TCTGGTGAGC CCTGTGGATT TTGTTATATG GCGATACAGC TGGCTAAAAT CAGTCGGGTC
ATCGTCTTAG TCGATCGCCA CGAAGCTTGC CAATATGGCT TTGATTATCG TTGGACCTAT
CAGCTATTGC AGGAGTCGAA ATTGCAAATT GAGATCAGTA AATGGCCGCA GTTGAATCAT
CGGCTTCAGC CATTTCGCCA AAGTTCTATT GGGTTAGCCT CAATCGGCAT GTAG
 
Protein sequence
MCNHFLPAVN HTLALAQKEV EGTGLPFSAV IVDESGRIVA EGVNRVQALH DCTAHAEIQA 
IRMATLLLKQ VSLEGMTLIA SGEPCGFCYM AIQLAKISRV IVLVDRHEAC QYGFDYRWTY
QLLQESKLQI EISKWPQLNH RLQPFRQSSI GLASIGM