Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0096 |
Symbol | |
ID | 4255558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 110459 |
End bp | 111040 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638120691 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_736159 |
Protein GI | 114045609 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAC GCCAGTTTTT TAAACTGTGT GCGGCCGGAG CGGCAACCTC AGCGATTTCA GCGCTGGGAT TGATGTCCGA AAAGGCCTAT GCAGCAGTGC GAGAGTTTAA GCTGATCGGA GCCAAAGAAA CCCGTAATAA CTGTCCGTAT TGCTCGGTCG GTTGTGGCCT GCTGATGTAC AGCCAAGGCA GTGGGGGCAA AAACTCTGAG CATGCTATTT TCCATATCGA GGGTGATGCC GATCATCCAG TAAACCGAGG TGCATTGTGC TCTAAGGGTG CAGGCCTTGT GGATTATGTT AACAGTCCAC ACCGTTTACA GTATCCAGAA TATCGCGCCC CCGGCAGCAA TAAGTGGGAA CGGATCAGCT GGCATGATGC CTTTAAACGT ATCGCTCGTT TAATGAAAGA TGACCGTGAT GCGAACCTGA TTGAGAAAAA CGCCGATGGC GTAACGGTTA ACCGTTGGTT AACCACAGGG ATGATGACCT CATCCGGTAT GGCCAATGAA AGTGGCTTAG CGACACAAAA ATTTGCGCGC GCTTTAGGCC TAGTGGCTAT CGATACTATT GCACGTAACT GA
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Protein sequence | MNRRQFFKLC AAGAATSAIS ALGLMSEKAY AAVREFKLIG AKETRNNCPY CSVGCGLLMY SQGSGGKNSE HAIFHIEGDA DHPVNRGALC SKGAGLVDYV NSPHRLQYPE YRAPGSNKWE RISWHDAFKR IARLMKDDRD ANLIEKNADG VTVNRWLTTG MMTSSGMANE SGLATQKFAR ALGLVAIDTI ARN
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