Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0088 |
Symbol | |
ID | 4255550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 100052 |
End bp | 100783 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638120683 |
Product | hypothetical protein |
Protein accession | YP_736151 |
Protein GI | 114045601 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACA CGATTTTCAC CCTGTCGCAA TTTGTGCATA TTACCGCGGG CGCACTGGCA TTAGTGTTAT TTTGGATGCC TGCCATGCTG AAAAAGGGCA GCGCGAACCA TAGTCGTTTT GGCCGTTATT ATGTTTATGC CATGTACACA GTGGCGGCGA CGGGCGTGAT GATGGCAACG GCGGGCCTCA TTGATCCGCT CGCGGTGATT AAACAGCCTG CGGCCAGCGC CGATGCTTTA GCAGCGCAGA TTGCGGATCG TAAAAATGCT TGGATATTTC TCATCTATAT CAGCTTGTTA ACCCTCGTAA CCGTTAGGCA TGGCGTGTTA GTTCTGCGTT ATAAGGCGCA GCGTCAGCAA TTAAAATCGC CGCTGCATTT GTCGTTAATG CTGAGCTTGA CGTTACTTGG CCCCGTGATG GCGATATGGG GATACCAAGA AAAGCTGATC CTCGCGATGA TTTTCGGCCT GTTAGGCACT ACGGTTGGGG CGGGATTCTT GCGTTATAGC GTTAAGGCGA CCCTGACCAA ATTAGAATGG TGGATTGAGC ATTTAGGCGC CATGATTGGC TCGGGTATCG CCTGTTACAC CGCCTTTTTC GCCTTTGGTG GCAGCCGTTT GTTTATCGAC CATGGCAATT TGCGTCTGCT GTCGTGGACA CTGCCAGGTG TTATCGGTTT TGTGGTGATC CGCTATTTAA GCGGCAAGTA TCAACGTCGT TTTGCGGATT AA
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Protein sequence | MMNTIFTLSQ FVHITAGALA LVLFWMPAML KKGSANHSRF GRYYVYAMYT VAATGVMMAT AGLIDPLAVI KQPAASADAL AAQIADRKNA WIFLIYISLL TLVTVRHGVL VLRYKAQRQQ LKSPLHLSLM LSLTLLGPVM AIWGYQEKLI LAMIFGLLGT TVGAGFLRYS VKATLTKLEW WIEHLGAMIG SGIACYTAFF AFGGSRLFID HGNLRLLSWT LPGVIGFVVI RYLSGKYQRR FAD
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