| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0085 |
|---|
| Symbol | |
|---|
| ID | 4255810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 97339 |
|---|
| End bp | 98019 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638120680 |
|---|
| Product | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
|---|
| Protein accession | YP_736148 |
|---|
| Protein GI | 114045598 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4229] Predicted enolase-phosphatase |
|---|
| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR01691] 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATCA GAGCCATAGT CGTAGACACA GCAGGCACCA CGACAGACCT AACCTTTATC
CAAGATGTGC TATTCCCCTA TTCTGTCAAA GCCTTACCAG ACTTTTTAGC GCAGAACCAA
CACAATGTCT TGGTGGAAAA CTGTATCTGC GACACCCGAG ATATCGCCCT CGAACCCGAT
GCCGATTTAG CCCGCGTGAC TGAAATTTTG CAGCAATGGG TACATGAAGA CCGCAAAGCG
ACCCCACTCA AAACCCTACA GGGTTTGATT TGGAAGCAAG GTTACGCCCA TGGCGAATTT
ACAGGCCATA TCTTCCCCGA CTTTATCGAG GCGGTTAACC GTTTTAGCGC GCAAAAACTT
CGTATTTACA GCTTCTCTTC GGGTTCGGTT GAAGCCCAAA AACTGCTGTT CAGCCACAGT
GATGGCGGCG ATTTAACCGA AATGTTTAGC GGCCATTTTG ATACCCGTAC CGGTAACAAA
TTAGATAAAC AAGCCTACGC CAACATACTC AACACCATCA GCCTAAGCCC TAAGCAAGTG
CTATTTGTGT CCGACGTGGT GGAAGAGCTT AAAGCCGCCG AAGCCGCAGG CATGATGACC
TGCCAAATGG TGCGCGACAG CAAACAACGC ACCGGCGATT TTCGCACTAT CAACAGTTTC
GATGAGCTAG TGATCGACTA A
|
|---|
| Protein sequence | MGIRAIVVDT AGTTTDLTFI QDVLFPYSVK ALPDFLAQNQ HNVLVENCIC DTRDIALEPD
ADLARVTEIL QQWVHEDRKA TPLKTLQGLI WKQGYAHGEF TGHIFPDFIE AVNRFSAQKL
RIYSFSSGSV EAQKLLFSHS DGGDLTEMFS GHFDTRTGNK LDKQAYANIL NTISLSPKQV
LFVSDVVEEL KAAEAAGMMT CQMVRDSKQR TGDFRTINSF DELVID
|
|---|
| |