Gene Shewmr7_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0081 
Symbol 
ID4255806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp95250 
End bp95714 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content46% 
IMG OID638120676 
Productthioesterase superfamily protein 
Protein accessionYP_736144 
Protein GI114045594 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATG CAATGGAAAG TCCAACACTA AGTCCAATGG AAAAGTTTCT CGCACAGCAC 
CCTATAGTGA CCGAAATCCC CGTGGCTTGG GGCGAAATGG ATGCGCTGCA ACACGTCAAC
AACGTGGTCT ATTTCCGCTA TTTTGAAACC GCACGTATCG ACTTTTTCAA CCGCCTTTTT
CCACTCGATG CCCTGTATAA ATCCGGTGTT GGTCCAGTGA TTAGCGAAAA TCAGGCCCGC
TATAAACGTC CAGTAACCTT CCCCGATACC CTATTGGTCA GCGTGAGTAT CAGCGATATT
CAAAGCGACA GATTTACCAT GCATTATCAG GCCTTTAGTA AGCAGCAACA GGCCATCACG
ACCTTAGGTA CTTCGGTCGC AGTGATGTTT AACTTTAAAA CTGGTCAAAA AGCAGAGCTT
CCCACGGAAT TACTCGCCAT TCTTAAACAA CACGAGCAAG CTTAA
 
Protein sequence
MSNAMESPTL SPMEKFLAQH PIVTEIPVAW GEMDALQHVN NVVYFRYFET ARIDFFNRLF 
PLDALYKSGV GPVISENQAR YKRPVTFPDT LLVSVSISDI QSDRFTMHYQ AFSKQQQAIT
TLGTSVAVMF NFKTGQKAEL PTELLAILKQ HEQA