Gene Shewmr7_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0071 
Symbol 
ID4255796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp84151 
End bp84885 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content55% 
IMG OID638120666 
ProductABC transporter related 
Protein accessionYP_736134 
Protein GI114045584 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG4555] ABC-type Na+ transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAG TATCCCATCT TTCTAAGCGC ATCGGCGAAG TGCAGGCCCT AAACGATTTG 
AGCTTCGTGG CCGAAAACGG CCAGATCACC GGCCTGCTCG GCCCCAATGG CGCGGGTAAA
ACCACCTGTT TACGCACGAT TTTCGGCCTG TTAAAACCCG ACACTGGCAC GGCTGAAATT
GAAGGTATCG ACGTTGCCAT CGACCCAATT GGCGCTAAGC AGCAGTTAGG CTTATTCCCC
GACCCGTTCG GTCTGTATGA GCGCTTAACA CCGCGGGAAT ATATCCGTTA CTTTGCCGAA
CTCAGCGGTT TATCCGCGAG CGATGCCAAG GCGGCCACCG ACAATGTCAT CGCCAAATTG
CGCCTCGAAG ATATCAGCGA TCGCCGCTGT AAGGGCTTCT CCCAAGGGCA AAGAATGAAG
ACTGCCCTCG CCCAGGCCAT AGTCCACAGC CCAAGCAATA TTATCCTCGA CGAGCCGACC
CGTGGACTCG ATGTCATGAG CACTCGTTTG CTGCGCGACA TTCTTATCGA CCTTAAGAAT
CAAGGGCATT GTGTGCTGTT TTCCAGCCAT GTGATGCAGG AAGTCGCGGC ATTGTGCGAC
CAAGTGATCG TGATGGCGCA GGGCCGAGTG GTCGCCATCG GCAGCCCTGA ACAGCTCTGC
GCGCAAACGG GTAAGTCCTC ACTCGAAGAT GCCTTTATCC AGCTGATCGG CACCGATGAG
GGGATTGCCG CATGA
 
Protein sequence
MIKVSHLSKR IGEVQALNDL SFVAENGQIT GLLGPNGAGK TTCLRTIFGL LKPDTGTAEI 
EGIDVAIDPI GAKQQLGLFP DPFGLYERLT PREYIRYFAE LSGLSASDAK AATDNVIAKL
RLEDISDRRC KGFSQGQRMK TALAQAIVHS PSNIILDEPT RGLDVMSTRL LRDILIDLKN
QGHCVLFSSH VMQEVAALCD QVIVMAQGRV VAIGSPEQLC AQTGKSSLED AFIQLIGTDE
GIAA