Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0065 |
Symbol | |
ID | 4256599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 79461 |
End bp | 80420 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638120660 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_736128 |
Protein GI | 114045578 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00032055 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGGTAT TACTCAGTTT CGGTGAGGTG TTAGTGGATT TATTGCCCAC AGATATTAGC GGCAAGTCCC ATCAAGCCAT TGCGGGCGGC GCGCCTGCAA ACGTGGCTGT GGGTTATGCC AAACTGGGGG GCAAGAGTTA CTTTGCCGGC GGCATCAGCA CCGATGATTA TGGGGCTATG TTAAAACAAG CCCTAGCGAA TGAAGGGGTT GTAACGGATT ACTTGACCCA AGTGCCGGAG GCGCCAACGG CGACTGTGGT GGTAAATTTG GATGAGCATG GCGAACGGAC CTTTGAGTTT AACCGCCAAG GGACTGCCGA TCTTTGCTAT AGCCAGCGCC ATTTTGATGC CATTCCATGG CAACAGATGG ATATTTTTCA TCTCTGCTCC AATACCTTTA CCGAAGCCGC CATATTTAAC GCGAGTCTCT ATGGCGCTCG TTGTGCTAAT TCATTCAATA AGATAGTGAG TTTTGATGTT AACTTACGCT TATCGCTCTG GCCCGATATC GCATTGCTTG CTGAGCGGGT TGAGCAGTGT TTTCGTTACA CACAAGTGCT GAAAATGAGC CGTGAAGAGG CTGAGTATTT AGCGTTAACG CGGAATAAGA GTTTTGAAGA TTATTTGCAG TTTTGTTTGG CGCAAGGTGT TGAAGTTATT CTTATTACTG ACGGTGCCAA TCCAGTGCAA TGCATCACAG TGAATGAACG ATTTAGCGTG CCAGTCCCAC AAATTAAAGC CGTTGATACC ACGGCGGCGG GCGACAGCTT TATGGCGGGT TTTTTGTTTG CACTGGGTTC TGAGTTGGCG TTTGATCTCG AGCATCTAAC CTTAAAACAT CGACTCGCAT GTCAGACACA GTTGCGCAAG GCGATTGAGT TTGCGGTGCG TTGCGGCGCC GTAACCTGTG GGCAGAAGGG CGCTTTCCCT GCCTTGCCCA CACTGTCACA GGTGAGTTAA
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Protein sequence | MTVLLSFGEV LVDLLPTDIS GKSHQAIAGG APANVAVGYA KLGGKSYFAG GISTDDYGAM LKQALANEGV VTDYLTQVPE APTATVVVNL DEHGERTFEF NRQGTADLCY SQRHFDAIPW QQMDIFHLCS NTFTEAAIFN ASLYGARCAN SFNKIVSFDV NLRLSLWPDI ALLAERVEQC FRYTQVLKMS REEAEYLALT RNKSFEDYLQ FCLAQGVEVI LITDGANPVQ CITVNERFSV PVPQIKAVDT TAAGDSFMAG FLFALGSELA FDLEHLTLKH RLACQTQLRK AIEFAVRCGA VTCGQKGAFP ALPTLSQVS
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