Gene Shewmr7_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0058 
Symbol 
ID4256592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp69785 
End bp70522 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content51% 
IMG OID638120653 
Producthypothetical protein 
Protein accessionYP_736121 
Protein GI114045571 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.101674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000370653 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAACAG ACCCTCTTTT TTGGCTGGTG GCGATTCCAG CGGTGTTGAT CACTGGGATC 
TCTAAATCGG GTTTTGCCGG CGGCGTCGGT GGCCTGACCG TGCCCCTGTT AGCGCTGGCC
ATAAGCCCGG CAACAGCGGC GGCAATCATG TTGCCACTGC TGATTTATAT GGATTTTTTA
AGTGTTCGCT CCTGGTGGGG CCAACATAAT CCTCGCCAAT TATGGATCCT TTTACCCGCA
GCGATTGTGG GCATAGGCAT AGCCTATTGG CTGTTCGACC GCTTAAACGA AGATTACTTA
CGGGCGATTT TAGGCTGTGT GTCCTTAGGT TTTGGCCTTT ATGGCTTGAT ATTAGGGGAT
AAAACCCAAG CAACGCCTTC GCCACTCGTG GGGCGGCTTT GCGGCTTAAC CGCAGGCTTT
ACTAGCTTTG TGGCCCATGC GGGTGGGCCG CCACTCAATG CCTATTTGCT GCCGTTACGC
TTGGCCAAGC CAGAGTTTTT AGCCACGGCA GTGGTATTTT TTGCGGTGGT GAATCTGGTT
AAGTTGGTGC CCTACAGTCT GCTCGGGCAA ATTAACCAAG GTAACATTCT GATTTCGCTA
TTACTTGCGC CTTTGGCTTG GTTAGGCGTA AAACTGGGGC TGGCGATCCA AGATAAGATC
AGCGATAGGT TGTTTAAACG CATCATCTTG ATTTTAATGG TGCTGGTGGG TATTCGTTTA
TTGTGGACGG CGTTATAG
 
Protein sequence
MLTDPLFWLV AIPAVLITGI SKSGFAGGVG GLTVPLLALA ISPATAAAIM LPLLIYMDFL 
SVRSWWGQHN PRQLWILLPA AIVGIGIAYW LFDRLNEDYL RAILGCVSLG FGLYGLILGD
KTQATPSPLV GRLCGLTAGF TSFVAHAGGP PLNAYLLPLR LAKPEFLATA VVFFAVVNLV
KLVPYSLLGQ INQGNILISL LLAPLAWLGV KLGLAIQDKI SDRLFKRIIL ILMVLVGIRL
LWTAL