| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0055 |
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| Symbol | |
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| ID | 4256589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 66566 |
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| End bp | 67297 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638120650 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_736118 |
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| Protein GI | 114045568 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000989316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000468323 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTAAAAG CCATCATAGT TGAAGATGAA TATCTAGCCC GTGAGGAGCT GGAGTATTTA
GTAAAGAGCC ACAGTGAGAT AGACATAGTG GCAAGCTTTG AGGATGGCTT GGAAGCCTTT
AAATATTTGC AGGATCATGA GGTCGATGTG GTGTTTTTGG ATATCCAAAT TCCGTCTATC
GATGGCCTAT TGCTGGCGAA AAATCTGCAT AAATCGACCC ATCCACCCCA TGTGGTGTTT
GTCACAGCCC ATAAAGAATT TGCAGTAGAA GCGTTCGAAC TCGAAGCCTT CGATTATATT
CTCAAGCCCT ACAATGAGCC GCGGATCATC AGTTTATTGC AGAAAATTGA GCAAGTTGGG
CGACAAGCAC CCAAGCCGCA GCATGAGGCT GCGAGTAACG CCAGTCGTAC CGTCAACTTA
GTCAAAGGTG AGCGGATTAT CGTCACGCCC TGCGAGCAAA TTTATTACGC CGAGGCCGAT
GAAAAACTCA CCTATGTGTA TACCCGCACC GACCGCTATG TGATGCAGAT GACCATCAGC
GAGTTTGTCA GCCGCTTGCC CGCCGAGGGC TTTTTCCGTT GCCACCGTTC CTATTGCGTC
AATATCAACA AAATCCGCGA AATCGTGCCC TGGTTTAATA GCACTTATCT GATCCGCTTG
CATGATTTGT CGTTCGAGGT GCCCGTTAGC CGTAGTAATA TTAAGGCTTT TCGACAGCTG
ATGAGGCTGT AA
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| Protein sequence | MLKAIIVEDE YLAREELEYL VKSHSEIDIV ASFEDGLEAF KYLQDHEVDV VFLDIQIPSI
DGLLLAKNLH KSTHPPHVVF VTAHKEFAVE AFELEAFDYI LKPYNEPRII SLLQKIEQVG
RQAPKPQHEA ASNASRTVNL VKGERIIVTP CEQIYYAEAD EKLTYVYTRT DRYVMQMTIS
EFVSRLPAEG FFRCHRSYCV NINKIREIVP WFNSTYLIRL HDLSFEVPVS RSNIKAFRQL
MRL
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