| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0051 |
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| Symbol | |
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| ID | 4254944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 61527 |
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| End bp | 62216 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638120646 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_736114 |
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| Protein GI | 114045564 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0030378 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTTATA AGGTATTAGT GGTGGATGAT GAGCCGCAAA TCCATACCTT TATGCGGATC
TCACTCGAGG CGGAAGGCTT TGAATACTTA AGCGCCACCA GCATAGCCAC GGCGCTTAAA
CAATACCAAA GCCACCAGCC GCACCTTATC GTGCTCGACC TCGGCCTGCC CGATGGCGAT
GGTATCGAAT TGCTCCATGG GCTGCGCCAG CAGGATAAGA CCCCAGTGCT GGTGCTCACC
GCCCGCGATC AGGAGGAAGA AAAAATCCGC CTGCTAGAGG CAGGTGCTAA CGATTATCTG
AGTAAGCCCT TTGGCATCAG GGAATTAATC GTGCGTATCA AGGTATTAGT CCGTGATCTT
GTGGATACCT CAAGCACCAT CGATATGCTG CAATTTGGCC CGCTCACCCT ACAAAAGAGC
AGCCATCAAT GCTGGCTGAA TCAACAGGAA GTGGCACTCA CTAAAAAGGA ATTTGCCCTG
CTCGCCCAAC TCATGTCCCA CCCGGGGCAA TTACTGAAAC AGAGCGAACT GCTGCGCAAT
ATCTGGGGCG AGACTCATCA GGAAGATAGC CACTATCTGC GGATTTTAGT CCGCCAACTG
CGTAAAAAGC TCAACGACAG CGACGAACAG CAGCTGATCA AAACCGAACC CGGCTTAGGG
TATCGACTCA CCGACCTCGG CCCGCCCTAG
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| Protein sequence | MAYKVLVVDD EPQIHTFMRI SLEAEGFEYL SATSIATALK QYQSHQPHLI VLDLGLPDGD
GIELLHGLRQ QDKTPVLVLT ARDQEEEKIR LLEAGANDYL SKPFGIRELI VRIKVLVRDL
VDTSSTIDML QFGPLTLQKS SHQCWLNQQE VALTKKEFAL LAQLMSHPGQ LLKQSELLRN
IWGETHQEDS HYLRILVRQL RKKLNDSDEQ QLIKTEPGLG YRLTDLGPP
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