| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0049 |
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| Symbol | |
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| ID | 4254942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 59421 |
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| End bp | 60782 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120644 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_736112 |
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| Protein GI | 114045562 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00330667 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGTTCAAT GGCATCCTTC GCTCACCCTA GAGCACACAC CTAAAAGCGG TAAAAAACTC
TTTGGCGCGC CGCCTTTTAT CTTAAGTGTC AGTTTTGCTC TGCTGATCTT AGTTGGCACT
TGCTTGCTTA AACTGCCCAT CGCCACCGAG TCGCCCATTA CCTGGCTGCA AAGCCTCTTT
ACCGTGACCT CGGCGGTGAC GGTCACAGGG CTTGTGGTCG TCGATACAGG CAGTGTGTTC
ACGCCCTTTG GCCAAGTGAT TATCGCGCTG TTAATTCAAT GCGGCGGCCT AGGTTTGATG
ACCTTTGCCA TAGTCACACT AATAGCGCTG GGCGGTAAGA TAGGTTTCTT GCAGCAAACA
GTGGCGAAAG AAGCGTTTAA TCAAACCGAT ACCTCCACCT TAGTCTCGAC CGCTAAGGCC
GTGCTGGTGT TTTCGCTATT GGTTGAAGCT GTGGGTATGC TGATTTTATC TGTCTATTGG
AGCGGCGAGT TGGGCTGGCA AACCAGCCTG TTTCATGGGT TCTTTTATAC CGTTAGCGCC
TTTAATAACG CGGGTTTTGC CCTAAGCCCA GATAGTTTAA TCCCCTATGT GGCCGACCCA
GTCGTTAACC TCACTATCAC AGGTTTATTT ATTGTGGGCG GCCTTGGGTT TTCGGTGTGG
ATTGACCTCA AGCGCAATAA ACGTTGGTCG AAACTCACCG TCTACAGCCG CATGATGATA
ACTGGCACCA TACTGATCAA TGCCGTAGCC GTGATAGCCA TTTACCTGAT TGAGTACAAC
AACCCCAACA CCCTCGCGCC CTTAAGCGAA CTCGGCAAAT GGTTAGCCTC TTGGTTTCAA
GCCGTAACCC CGCGCACCGC AGGCTTTAAC ACCCTACCCA TAGACCAACT CGAGGATGGT
TCCACCCTAT TGATTTTAGT GCTGATGTTT ATCGGCGGCG GCTCCCTCAG CACCGCCAGC
GGCATTAAGG TCGTGACCTT TATGGTGCTT ACTCTCGCCA CCTACGGCTA TTTACGCCGC
GATGAAGCAG TGTATGTGTT TAAGCGGGAA ATCCCCAAAG ACACCATTAG CAAGGCACTC
GCCCTGACGA TGATCTCCAT CGGCGTCACT TGGCTGGCAA TATTCGCCCT CGTGCTTACC
GAAAAAGCCC CAATTATGGA TATCGCCTTC GAAGCCGTAT CCGCCCTCGG CACAGTTGGG
CTATCCCGCG GATTAACAGG CAATTTATCC AGTGCAGGCC AAGGAATTAT TATCTTTATG
ATGTTTATGG GGCGCCTCGG CCCACTGATG CTGGCCTACT TCCTTGCCAA CCCAAGGGTA
AAAAAGCTGC GCTATGCAGA AACCAAATTG GCAATTGGGT AA
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| Protein sequence | MVQWHPSLTL EHTPKSGKKL FGAPPFILSV SFALLILVGT CLLKLPIATE SPITWLQSLF
TVTSAVTVTG LVVVDTGSVF TPFGQVIIAL LIQCGGLGLM TFAIVTLIAL GGKIGFLQQT
VAKEAFNQTD TSTLVSTAKA VLVFSLLVEA VGMLILSVYW SGELGWQTSL FHGFFYTVSA
FNNAGFALSP DSLIPYVADP VVNLTITGLF IVGGLGFSVW IDLKRNKRWS KLTVYSRMMI
TGTILINAVA VIAIYLIEYN NPNTLAPLSE LGKWLASWFQ AVTPRTAGFN TLPIDQLEDG
STLLILVLMF IGGGSLSTAS GIKVVTFMVL TLATYGYLRR DEAVYVFKRE IPKDTISKAL
ALTMISIGVT WLAIFALVLT EKAPIMDIAF EAVSALGTVG LSRGLTGNLS SAGQGIIIFM
MFMGRLGPLM LAYFLANPRV KKLRYAETKL AIG
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