| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0041 |
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| Symbol | |
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| ID | 4254934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 48380 |
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| End bp | 49585 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120636 |
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| Product | C-terminal processing peptidase-3 |
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| Protein accession | YP_736104 |
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| Protein GI | 114045554 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.660161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00325128 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACAAC TAATCCGCAA TATCGTCTGC CTTGGACTCG GCCTAAGCCT AGGCCTGTCC
ATTAGCCTCT CCAGCCAAGA GAATGCCAAG TCATATCAGA GTGACTTCGA CTACCCGCTA
TTGCAGGATG TATTAGAAAC CGTCGAAACC TATTACGTTA AAACCGTTTC CAAAGATGAG
CTGGTGCAAG CCGCCATTAA AGGGATTTTT GAGCATTTAG ATCCCTATTC CAGCTTTTTA
AATCACCAAG AGTTACTCGA CTTAAAAGAC TCAAATCGGG GCGAATACTT CGGTTTTGGC
TTTGAGGTCG CCAGCGATAA AGACCATATA AGCATTATCG CGCCCTTTGC CAATTCCCCC
GCCGAACAGG CCGGTATCCA AGCGGGCGAT ATCATTATCA AGCTGAATGA CACTCCAACT
ACCGAAACCA ATCTTGCGGA TATCCTCAAT CAAATCAAAC AACATAGCCT CAGCAATCAA
AGTATTCGCC TGACGCTTAA ACACCGTAAT GATGCAGTAG AGTTTGAGGT ATCCCTTAAG
CCCAGCACCA TTACGATTCA ATCTGTCGCC AGCAAATTAC TGGATGGTAA TATCGGCTAC
GTTAGGCTCA GTAGCTTTCA AGAGAACTCC ACCGAAGACA TGGTGCGCAG TTTAAGCCAG
TGGCAAAACG CGCATCTTAC GGGCCTGATT TTAGATTTAC GCAATAATCC CGGCGGCTTG
CTGGATCAGG CAATCAAAAT TGCCGATCTG TTTTTAGCGA AGGGCCGAAT CGTCTCAACC
TCTGGCCGCT TTTTCGATGC CAATTCCGAC TATTACGCCT CACCGCAAAC CATGCTGACC
AATGTGCCTA TGTTAGTGCT GATCAACAAA GGCTCGGCCT CCGCCTCCGA AGTCCTCGCC
GCCGCCCTGC AGGAAAATGG CCGCGCCAAG CTGCTCGGTG AAACCAGTTT TGGCAAAGGC
ACAGTGCAAA GCCTGATCCC CATACTGAAC GACGGCAACG CCATCAAGCT CACCATCGCC
CAGTACAACA CGCCCAGAGG GGAAAATATT CACGATATCG GCATTGTGCC CGACATTAAA
GTTGCAGCCG AAACTGGCTC CAATCAAAAG AATATGGCTA TAATCGACAC CATCTCAGCA
CGAACCGATG TCAGCCAAGA CAGCCTAGTC ACCTCGGCAA TCGCTTGGAT GCAACATCAT
GACTAA
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| Protein sequence | MKQLIRNIVC LGLGLSLGLS ISLSSQENAK SYQSDFDYPL LQDVLETVET YYVKTVSKDE
LVQAAIKGIF EHLDPYSSFL NHQELLDLKD SNRGEYFGFG FEVASDKDHI SIIAPFANSP
AEQAGIQAGD IIIKLNDTPT TETNLADILN QIKQHSLSNQ SIRLTLKHRN DAVEFEVSLK
PSTITIQSVA SKLLDGNIGY VRLSSFQENS TEDMVRSLSQ WQNAHLTGLI LDLRNNPGGL
LDQAIKIADL FLAKGRIVST SGRFFDANSD YYASPQTMLT NVPMLVLINK GSASASEVLA
AALQENGRAK LLGETSFGKG TVQSLIPILN DGNAIKLTIA QYNTPRGENI HDIGIVPDIK
VAAETGSNQK NMAIIDTISA RTDVSQDSLV TSAIAWMQHH D
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