| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0035 |
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| Symbol | aroE |
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| ID | 4257177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 39105 |
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| End bp | 39983 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638120626 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_736098 |
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| Protein GI | 114045548 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00784696 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0101527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGATA TGCCTTCAGT AACTACGCCA GCGCTTGATC GATATGCCGT ATTTGGCAAT
CCGATAGGTC ACAGTAAATC GCCCTTTATT CATGGACAGT TTGCGTCCAT TACACAGCAG
CCTTTGAGTT ATGAGGCGAT TCTGGCGCCC ATCGATGGTT TTGAAGCGAG TTTACGAGCA
TTTTTTCAGG CGGGAGGAAA GGGCGCGAAT GTGACAGTTC CCTTTAAAGA GCAAGCCTTT
GCTCTCTGCG ACAGCCTAAG TGCCGAAGCG ACGCTGGCGG GGGCGGTCAA TACCCTAAGC
TTGTTGGCCG ATGGCACTAT TTATGGTGAT AACACCGATG GTTTGGGGCT GGTGGCCGAT
CTTATTCGCC ATCTCGGCAG TTTGCAGCAT AAGCGGGTGC TCTTGGTAGG GGCTGGTGGC
GCGGCGCGCG GCTGTATCTT GCCATTGCTT AAGGCAGAAG TCGGTCAATT GGTTATCACC
AACCGGACCC AAAGTAAGGC GCAGGCCTTA GTGGAGATAT TTAGCCAAGT ACAACAAGGG
CGTTACAGCG ATAAACTCCA GTCGATGCCG ATGCCTGAGT TGTCGGGGGA GTTCGATTTA
GTGATTAACT CGACCTCAGC GAGTCTAGCG GGGGAGCTAC CGCCACTACC ACAGTCCATC
ATCGGCAATA AAACGGCTTG CTACGATATG ATGTATGGCG CAAAACCAAC GGCATTTAAT
CAATGGGCTG TGCAACAGGA CGCAGCGCAA GTGATTGATG GACTAGGTAT GCTTGTCGGT
CAGGCGGCAA AGAGTTTTGC GCTCTGGCGT GGCGTCGAGC CAGATACCTC AGGAGTGCTT
AAATTGCTCA GGGACAAACT ACAGGCCGAC GCGCAATAG
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| Protein sequence | MTDMPSVTTP ALDRYAVFGN PIGHSKSPFI HGQFASITQQ PLSYEAILAP IDGFEASLRA
FFQAGGKGAN VTVPFKEQAF ALCDSLSAEA TLAGAVNTLS LLADGTIYGD NTDGLGLVAD
LIRHLGSLQH KRVLLVGAGG AARGCILPLL KAEVGQLVIT NRTQSKAQAL VEIFSQVQQG
RYSDKLQSMP MPELSGEFDL VINSTSASLA GELPPLPQSI IGNKTACYDM MYGAKPTAFN
QWAVQQDAAQ VIDGLGMLVG QAAKSFALWR GVEPDTSGVL KLLRDKLQAD AQ
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