Gene Shewmr7_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0031 
Symbol 
ID4257173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp36248 
End bp36811 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content47% 
IMG OID638120622 
ProductDNA topoisomerase type IA Zn finger domain-containing protein 
Protein accessionYP_736094 
Protein GI114045544 
COG category[L] Replication, recombination and repair 
COG ID[COG0551] Zn-finger domain associated with topoisomerase type I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0894147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGA TCGATGAACA ACTATTTAGT GCCCATGAGC ACGCACTGGA AAAAGAATTT 
GAGCTATGCC CTGAGTGTGG CAGCGAGTTG TCGGTAAAAC ATAGCAAACA TGGGAGTTTT
ATTGGTTGTA ACAACTATCC CACTTGTCAA TATACCCGTC CTTTAGTGCA GCATGAGTCG
ATTGAAACCC AAGTGATTGA AGGTTCCAAG TGTCCCGAGT GCGGCCATGA GTTGGCGGTT
AAATCGGGGC GTTTTGGAAT CTTTATCGGT TGCACTCAAT ATCCCAGTTG TACCCACATA
GAAAGGCCAG ATCAGGAGAG CGATAAACCT GAGGTGGCAT GTCCCGAATG CAAAACTGGC
AAGCTAGAGC ATCGTACCAG CCGTTTTGGT AAGAGTTTTT ATGCCTGCAG TGCGTATCCC
AAATGCAAAT TCATCGTGAA TTACCCTCCA GTTGCCGAAA CTTGCCCGAG TTGTGGCTTT
GGTATTTTAG TCGAGCGCAA AGGGGCCGCG GGGATGCGTT TAGAATGTCC GCAAAAAAGC
TGTAAATACA AACGCGCGCT TTAG
 
Protein sequence
MSKIDEQLFS AHEHALEKEF ELCPECGSEL SVKHSKHGSF IGCNNYPTCQ YTRPLVQHES 
IETQVIEGSK CPECGHELAV KSGRFGIFIG CTQYPSCTHI ERPDQESDKP EVACPECKTG
KLEHRTSRFG KSFYACSAYP KCKFIVNYPP VAETCPSCGF GILVERKGAA GMRLECPQKS
CKYKRAL