| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0025 |
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| Symbol | |
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| ID | 4257167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 30529 |
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| End bp | 31818 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638120616 |
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| Product | sun protein |
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| Protein accession | YP_736088 |
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| Protein GI | 114045538 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0912026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACT TGCGTGCACT GGCGGCCAAA GCCATCTTCG AAGTCTTAGA GAAAGGCGTG
TCACTTTCAG TTGCCCTGCC AGAACAGCAA AAGCATCTAG CCAGTGGTAA AGATAAAGCC
CTGCTCGCAG AGCTCTGCTA CGGCGTGATG CGCACCTTGC CGCAGATCGA AAAACGCGTG
GCCGAGTGTT TGGCTAAACC ACTGAAAGGT AAGCAAAGGA TCATCCACCA GCTATTAATT
GTTGGCTGTT ATCAACTTTA CTTCACCCGC ATTCCAAGCC ACGCCGCCAT CTCCGAAACC
GCCGAGGCCT GCCGTCAGTT AAAATTTGAG GGCATGGTAA AGGTCGTCAA TGGCGTGCTG
CGTAATATTC AGCGCCAATT AACGCCGCTG AGCACTGAGT CAGAGACCTT AAGCTACAAC
ACGCCGGGCT GGTTAATTAA GCGCTTAAAA GCCGCATATC CCGATAATTG GCAAGAGATA
ATCCTGCAAA GCCATGAGCG TCCACCCATG TGGCTACGTA ACAATCGCCT CTCCCAAAGC
CGCGATGCAT ATCTTGCCAC CCTGAGTGAA CTTGAGATAG AAGCCAGTGC GGGCCTCAGT
GATGATGCCA TTCTACTTGC CCATCCTAAG GATGTGGCGA CATTGCCGCG TTTCCATGAA
GGTGCGGCAT CGGTGCAAGA TGGTGCCGCC CAATGGGCCG CGACCTTACT GGCTCCGCAA
GCCAACGAAC TGGTCCTCGA TGCCTGTGCG GCACCGGGCG GCAAAAGCTG CCATTTACTC
GAACTTGAAC CCAGCATCCA ACTGGTCGCC GTCGATTTCG ATGCTAAACG TCTCGAGCGC
GTGCAACAGA ACCTTGACCG TTTGTCATTA AAAGCGGAAG TTATTCATGG CGATGCGGCC
AACATCGACT CATGGTGGCA GGGTGAACAG TTTGATCGTA TCTTACTCGA CGCGCCTTGC
TCGGCGACGG GCGTAATCCG CCGTCATCCC GATATCAAGT GGTTACGCAA AAACCATGAC
ATCGAAGAAC TGGCTGAGCT GCAAAGACAA ATTCTCGATC ACAGCTGGAA GTGGCTCAAA
CCCGGTGGCA CACTCCTGTA TGCAACTTGC TCTATTTTGC CGCAGGAAAA TCGAGACCAA
ATTAGTGCAT TTTTAGCCAG AACCGCAGAT GCTAAGCTAG ACACACTTGC CCAGCAGGCT
TCAAGCCAAG ATATAGGTTG GCAAATCACG CCGGGACAAC ACAACATGGA TGGGTTTTAT
TACGCCCGTT TATTGAAAGC GACCCATTAG
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| Protein sequence | MMNLRALAAK AIFEVLEKGV SLSVALPEQQ KHLASGKDKA LLAELCYGVM RTLPQIEKRV
AECLAKPLKG KQRIIHQLLI VGCYQLYFTR IPSHAAISET AEACRQLKFE GMVKVVNGVL
RNIQRQLTPL STESETLSYN TPGWLIKRLK AAYPDNWQEI ILQSHERPPM WLRNNRLSQS
RDAYLATLSE LEIEASAGLS DDAILLAHPK DVATLPRFHE GAASVQDGAA QWAATLLAPQ
ANELVLDACA APGGKSCHLL ELEPSIQLVA VDFDAKRLER VQQNLDRLSL KAEVIHGDAA
NIDSWWQGEQ FDRILLDAPC SATGVIRRHP DIKWLRKNHD IEELAELQRQ ILDHSWKWLK
PGGTLLYATC SILPQENRDQ ISAFLARTAD AKLDTLAQQA SSQDIGWQIT PGQHNMDGFY
YARLLKATH
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