| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0011 |
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| Symbol | |
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| ID | 4258044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 13000 |
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| End bp | 16188 |
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| Gene Length | 3189 bp |
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| Protein Length | 1062 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638120602 |
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| Product | amidohydrolase |
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| Protein accession | YP_736074 |
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| Protein GI | 114045524 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0957331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAAC CTAAGCTGAC ACCGCTTTAT ATCGCCCTGA TGCTTGGCCT TAGTTCCCAT
GCCGTACAGG CAACAGACGC ACAAAAAACC AGTTGGGACG TCAATGCGCC AGCCAATGCT
CCACTAGAAA AAGTGACCAT AGATGTAACC GAAGGCACTT GGATGAACAT CAGTGTCAGC
CCAGATGGTA AACATTTAGT GTTTGATTTA CTTGGCAATA TTTATCAAAT CCCCGTCACG
GGTGGAGAAG CAAAGCCATT AGCTCAAGGC ATAGCCTGGC AAATGCAGCC CGTGTATAGC
CCAGATGGTA AGCACATTGC CTTCACCTCA GATGCCGATG GTGGCGACAA CATTTGGATT
ATGGATGCCA ACGGCAGCAA TCCACGCACA GTCACGACGG AAACCTTTCG TTTACTCAAC
AGTCCTGCGT GGAGTCCTGA TTCACAATAT TTAGTCGGTC GAAAACATTT TACCGCCAGT
CGCAGTTTAG GCGCCGGCGA AGTTTGGCTC TACCACGTCG CCGGTGGCGA AGGCGTTAAA
CTGACCGAAC GTCCAAACGA TGAAAAGGAT TTAGGCGAGC CTGCCTATTC ACCCGATGGC
CGCTATATCT ATTTCAGTCA GGATGATACT CCGGGGAAAA CCTTCCACTA TTCCAAAGAC
TCGGTAAACG GCATCTATAA AATCAAGCGT TACGATACCC AAACGGGTGA TATTGAAATC
TTGATCGAAG GAACCGGTGG CGCCATTCGC CCAACACCGA GTCCTGACGG CACCAAACTA
GCGTATATCA AGCGAGATGA TTTCCAATCT TCCTTGTATT TACTCGATTT GAAATCCGGC
GAAACGACTA AGCTGTACGG CGATTTAGAC CGCGATATGC AAGAGACCTG GGCAATCCAC
GGTGTCTATC CCACCATGGC GTGGACACAA GATAATAAAG ATATTTTTTT CTGGGCTAAA
GGCAAAATCA ATCGCCTGAA TGTGGCCAAT AAGACGGTCA CCAACATTCC CTTCAGAGTC
AAGACCCAGC TAGACGTGCA GCCTTCAGTA CGCTTTAAAC AAGATATTGA TAAGGATGTA
TTCGACGTAA AAATGCTGCG AATGGCGCAA GTTTCACCGG ATGGCAGCAA GGTCGCCTTC
GAAGCTTTAG GTAAAATCTG GTTGAAAACA CTTCCCGACG GCAAGATGTC ACGCTTAACC
GAGTTAGGTA ATGACATTGA AGAACTCTAT CCGCAGTGGT CGCGTGATGG CAAAAATATT
GTCTTCACAA CTTGGAATGA CCAAGACCAA GGCACAGTAC AAGTGATCAG TGCTAAAGGT
GGCAAAGCGA AACAACTTAC CACTGAGCCA GGCAAATACG TCGAGCCCAC CTTTTCTCCC
GATAGCGAAC TTGTGGTGTA TCGTAAAACC CAAGGTGGAC ACCTCACGCC TCGAACTTGG
TCGCAGGAAC CTGGCCTGTA CAAGGTTGAT TTAAAAACCA AACAGAATAA GAAAATCACT
GCAGAGGGTT ATCAAGCACA ATTCGGAGCT TCGGCAGACC GCATTTTCTT TATGAACACT
GGTGAAAACG ACACGCCACA GCTTGCCTCA ATTAACCTAG ATGGTTTTGA TAAACGCGTT
CACTACAGCA GTAAGCATGC AACCGAATTT AGAGTTTCAC CCGACGGCGA ACAACTGGCC
TTTGCCGAGC GTTTTAAAGT TTGGGTTACC CCCTTTGCTA AACATGGTGA AACAGTTGAA
ATCGGCCCTA ACGCCAGCAA TCTTCCCGTC ACACAGTTAA GTGTGCGAGC TGGCGAAAGC
ATCAGCTGGA ATAGCAAAAG TAACCAACTC TATTGGACTC TTGGCCCAGA ACTGTACCAA
GCCGATGTTG ATTCTCAGTA TCTCAAAAAG GACGAGCAAG CTAAGCCAAG CATTATCAAT
TTAGGCTTTA CCGAAAAGGC AGATGTTCCA CGTGGAACAG TCGCCTTTGT CGGCGGTAAA
GTGATCACCA TGGAAAATGA CCAAGTCATC GATAAGGGTG TAGTGATCGT CAAAGACAAT
CATATTCTAG CCGTTGGCGA TGCAAACACG GCACTTCCAA AGGATGCACA AGTCATCGAT
ATAAGTGGCA AATCCATTAT GCCTGGTTTG TTCGATGCGC ATGCCCATGG TGCCCAGGCG
GATGATGAAA TCGTGCCACA ACAAAACTGG GCACTCTACT CTGGGTTATC CTTAGGCGTG
ACAACTATCC ATGATCCGTC AAACGATACC ACTGAGATTT TTGCCGCCTC GGAACAGCAA
AAAGTAGGTC ACATTGTTGG TCCACGGATT TTCTCGACTG GAACAATTCT CTATGGCGCA
AATGCTCCCG GCTACACCTC GCATATCGAC TCACTCGATG ATGCGAAATT CCATTTAGAG
CGACTGAAAA AAGTTGGTGC CTTTAGCGTT AAGAGCTACA ACCAACCGCG TCGTAATCAA
AGGCAGCAGG TTATCGCCGC TGCTCGTGAA CTCGAAATGA TGGTTGTGCC AGAGGGTGGC
AGCTTGCTAC AGCATAACCT GACCATGGTT GCCGATGGCC ATACCACCGT AGAGCACTCA
TTACCCGTAG CAAATATTTA TAACGATATT AAACAGTTCT GGAGCCAAAC TAAGGTCGGT
TACACTCCAA CCTTAGTCGT CGCCTACGGC GGTATCTCGG GTGAAAACTA TTGGTATGAT
AAGACCGATG TGTGGGCACA TCCGCGCCTG TCGATGTATG TTCCAAGCGA CATCTTGCAG
GCTCGCTCAA TGCGTCGGCC CCATGCCCCA GACAGTCACT ACAACCATTT TAATGTTTCG
AAAGTAGCAA ATGAGTTCAA TAAGTTAGGT GTGCATTCCA ATATTGGCGC CCACGGTCAG
CGTGAAGGGT TAGCCGCACA TTGGGAAATG TGGATGTTCG CCCAGGGTGG AATGAGCAAT
ATGGATGTGC TCAAAACAGC GACCATCAAC CCAGCCACCA CCTTCGGTCT AGAGCATCAA
CTTGGCTCAA TTAAAACCGG TAAGCTTGCA GACTTAATCG TAATCGATGG CGACCCATTA
GCGGATATTC GAGTTACAGA TAAAGTCACT TATACCATGG TCAATGGTAA GTTGTTTGAT
GCTGAGTCGA TGAACCAACT CAATGGTAAC AAGCAACAGC GTAAGCCTTT CTTCTTCGAG
AAAATCTAA
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| Protein sequence | MLKPKLTPLY IALMLGLSSH AVQATDAQKT SWDVNAPANA PLEKVTIDVT EGTWMNISVS
PDGKHLVFDL LGNIYQIPVT GGEAKPLAQG IAWQMQPVYS PDGKHIAFTS DADGGDNIWI
MDANGSNPRT VTTETFRLLN SPAWSPDSQY LVGRKHFTAS RSLGAGEVWL YHVAGGEGVK
LTERPNDEKD LGEPAYSPDG RYIYFSQDDT PGKTFHYSKD SVNGIYKIKR YDTQTGDIEI
LIEGTGGAIR PTPSPDGTKL AYIKRDDFQS SLYLLDLKSG ETTKLYGDLD RDMQETWAIH
GVYPTMAWTQ DNKDIFFWAK GKINRLNVAN KTVTNIPFRV KTQLDVQPSV RFKQDIDKDV
FDVKMLRMAQ VSPDGSKVAF EALGKIWLKT LPDGKMSRLT ELGNDIEELY PQWSRDGKNI
VFTTWNDQDQ GTVQVISAKG GKAKQLTTEP GKYVEPTFSP DSELVVYRKT QGGHLTPRTW
SQEPGLYKVD LKTKQNKKIT AEGYQAQFGA SADRIFFMNT GENDTPQLAS INLDGFDKRV
HYSSKHATEF RVSPDGEQLA FAERFKVWVT PFAKHGETVE IGPNASNLPV TQLSVRAGES
ISWNSKSNQL YWTLGPELYQ ADVDSQYLKK DEQAKPSIIN LGFTEKADVP RGTVAFVGGK
VITMENDQVI DKGVVIVKDN HILAVGDANT ALPKDAQVID ISGKSIMPGL FDAHAHGAQA
DDEIVPQQNW ALYSGLSLGV TTIHDPSNDT TEIFAASEQQ KVGHIVGPRI FSTGTILYGA
NAPGYTSHID SLDDAKFHLE RLKKVGAFSV KSYNQPRRNQ RQQVIAAARE LEMMVVPEGG
SLLQHNLTMV ADGHTTVEHS LPVANIYNDI KQFWSQTKVG YTPTLVVAYG GISGENYWYD
KTDVWAHPRL SMYVPSDILQ ARSMRRPHAP DSHYNHFNVS KVANEFNKLG VHSNIGAHGQ
REGLAAHWEM WMFAQGGMSN MDVLKTATIN PATTFGLEHQ LGSIKTGKLA DLIVIDGDPL
ADIRVTDKVT YTMVNGKLFD AESMNQLNGN KQQRKPFFFE KI
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