Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0007 |
Symbol | |
ID | 4258040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 8132 |
End bp | 9175 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638120598 |
Product | putative signal transduction protein |
Protein accession | YP_736070 |
Protein GI | 114045520 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0608223 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATTAAGT CCATATTTAA TAAAATCTTT AATATTCGTG AACAGACTAT TCTTGAGCGG CCTAAAAGCT TTAGTCAAAC CGAGCTCAGT AAACCTGTAA CGGCAGTCTC AGGTAAGCAA CTGCCGGAAG AGCCGCAGGA TACTTCTGTG AGTATTGATC TTGCGGCACT GTTTTACAGC CTGTTATTTC CGGCCAGAAC CAAAGATGCT GGTGGCGTTG CCAATAACCT TGAACGGCGC GTCATGGCTG AAATAGAGCT CGCCTTAGCA TCGCCACAAG TGATAGCCGA AAAGGTGCTG AAGCTTCCCT CTAAGGTTTT GGAATTAGAC CGTAAATTAG CTGAGCCACA GTTTGATACT AAGGACTTGT TGGCGCTAAT CGAGAAAGAT CCCTTACTGA GCGTCGAAGT GCTTAAACTG TGTAACTCTC CGGCCTTTAA GCGTGGCGAC CGAGAGGTAA CAAGCTTGCA GCAGGCCTTA GTGCAACTTG GCCGTGAACA GTTACGCCGT TTTGTAACGA GCTGCCTCGT GCGTGAGATG CTAGATATTA AACCCATTTA TTTCCGACGC TTTGGTGCCG AAATTTGGCG TCATTCGATG CAGGTGGCCT TTTTAACCAG TGAACTGAGT GAAGAAGATA GAGACACCGC ATTCCTATTA GGATTACTGC ATGATGTGGG TAAGCTCGCC ATCTTTAAAA TGCTACTCGA TGCCTTTGTA CAAGCAGAAC CTGGGGAGCA GCCAAACTCT TGGTTATTCC GACAAGTGAT GACGGCCAAA TCACTCACGT TAAGTGCTTT GTTGGCAAAG CATTGGCAAT TGCCAAGTAC CTTTGAAACC GAGCTGGATA AATTAGCCCA TGTTCATACT CGACCGAATG AGGGAATTGC CGCTGTGGTT TGGCGTGCCA ATATCATCAG TGAGATTTCG ATGCTGCAGC AAGCGGGTAA ATTGCCTGCT GACATGCTGA GCAACTTGTT AGCCTTGGTT GGACTGGAGC CCGCTCAATT CGAAGCATTG CACGAAAAAC TTCAGCAGTT TTAA
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Protein sequence | MIKSIFNKIF NIREQTILER PKSFSQTELS KPVTAVSGKQ LPEEPQDTSV SIDLAALFYS LLFPARTKDA GGVANNLERR VMAEIELALA SPQVIAEKVL KLPSKVLELD RKLAEPQFDT KDLLALIEKD PLLSVEVLKL CNSPAFKRGD REVTSLQQAL VQLGREQLRR FVTSCLVREM LDIKPIYFRR FGAEIWRHSM QVAFLTSELS EEDRDTAFLL GLLHDVGKLA IFKMLLDAFV QAEPGEQPNS WLFRQVMTAK SLTLSALLAK HWQLPSTFET ELDKLAHVHT RPNEGIAAVV WRANIISEIS MLQQAGKLPA DMLSNLLALV GLEPAQFEAL HEKLQQF
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