Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3937 |
Symbol | |
ID | 4254500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4699818 |
End bp | 4700258 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638120585 |
Product | flavodoxin |
Protein accession | YP_736057 |
Protein GI | 113972264 |
COG category | [C] Energy production and conversion |
COG ID | [COG0716] Flavodoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000104179 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCAAGA TTGCGATATT AGTCGGTACC ACCCTCGGCA GCAGTGAATA TATTGCGGAT GAAATGCAGG CTCAACTCAC GCCTTTAGGA CATGAAGTCG ATACCTTTTT GAGCCCAACT TTGGATGATC TGCAACCTTA TTCCCTTTGG ATCATCGTCT CATCGACTCA CGGAGCCGGT GATCTACCCG ACAATTTACA GCCATTTTGT AAAGAACTGC TGCTAAACAC ACCAGATCTT ACCCAAGTCC AATTCGCCCT ATGTGCAATT GGCGATTCGA GTTATGACAC CTTTTGCCAA GGCCCTGAAA AATTAATTGA AGCGCTCGAA TACAGTGGTG CAAAAGTCAT TGTGGATAAG ATCCAGATCG ATGTACAACA GGATCCAGTG CCAGAAGACC CAGCTTTAGC CTGGTTGGCA CAATGGCAAG ATCAAATTTA A
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Protein sequence | MTKIAILVGT TLGSSEYIAD EMQAQLTPLG HEVDTFLSPT LDDLQPYSLW IIVSSTHGAG DLPDNLQPFC KELLLNTPDL TQVQFALCAI GDSSYDTFCQ GPEKLIEALE YSGAKVIVDK IQIDVQQDPV PEDPALAWLA QWQDQI
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