Gene Shewmr4_3937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3937 
Symbol 
ID4254500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4699818 
End bp4700258 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content45% 
IMG OID638120585 
Productflavodoxin 
Protein accessionYP_736057 
Protein GI113972264 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000104179 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCAAGA TTGCGATATT AGTCGGTACC ACCCTCGGCA GCAGTGAATA TATTGCGGAT 
GAAATGCAGG CTCAACTCAC GCCTTTAGGA CATGAAGTCG ATACCTTTTT GAGCCCAACT
TTGGATGATC TGCAACCTTA TTCCCTTTGG ATCATCGTCT CATCGACTCA CGGAGCCGGT
GATCTACCCG ACAATTTACA GCCATTTTGT AAAGAACTGC TGCTAAACAC ACCAGATCTT
ACCCAAGTCC AATTCGCCCT ATGTGCAATT GGCGATTCGA GTTATGACAC CTTTTGCCAA
GGCCCTGAAA AATTAATTGA AGCGCTCGAA TACAGTGGTG CAAAAGTCAT TGTGGATAAG
ATCCAGATCG ATGTACAACA GGATCCAGTG CCAGAAGACC CAGCTTTAGC CTGGTTGGCA
CAATGGCAAG ATCAAATTTA A
 
Protein sequence
MTKIAILVGT TLGSSEYIAD EMQAQLTPLG HEVDTFLSPT LDDLQPYSLW IIVSSTHGAG 
DLPDNLQPFC KELLLNTPDL TQVQFALCAI GDSSYDTFCQ GPEKLIEALE YSGAKVIVDK
IQIDVQQDPV PEDPALAWLA QWQDQI