Gene Shewmr4_3930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3930 
Symbol 
ID4254493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4693261 
End bp4693512 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content48% 
IMG OID638120578 
ProductF0F1 ATP synthase subunit C 
Protein accessionYP_736050 
Protein GI113972257 
COG category 
COG ID 
TIGRFAM ID[TIGR01260] ATP synthase, F0 subunit c 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0039435 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00540943 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAACGA TTTTAGGCAT GACAGCTATC GCTGTTGCTC TGCTGATTGG TATGGGTGCT 
CTTGGTACTG CAATCGGTTT CGGCTTATTA GGTGGCAAGT TCCTGGAAGG CGCTGCGCGT
CAACCAGAAA TGGCTCCTAT GCTGCAAGTT AAAATGTTCA TCGTAGCGGG TCTGTTAGAC
GCCGTAACAA TGATCGGTGT TGGTATCGCA TTATTCATGC TGTTCACCAA CCCACTGGGT
GCAATGCTGT AA
 
Protein sequence
METILGMTAI AVALLIGMGA LGTAIGFGLL GGKFLEGAAR QPEMAPMLQV KMFIVAGLLD 
AVTMIGVGIA LFMLFTNPLG AML