Gene Shewmr4_3923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3923 
Symbol 
ID4254486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4686308 
End bp4687672 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content51% 
IMG OID638120571 
Productglucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase 
Protein accessionYP_736043 
Protein GI113972250 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.742518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0326769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTAA ATGTAGTGAT CTTAGCGGCA GGAAAAGGAA CTCGCATGCG CTCGGATCTT 
CCCAAGGTAT TACATCCTAT CGCCCACAAG AGCATGGTGC AGCATGTTAT CGATACCGCC
CACAGTATCG GCAGCGATGC CATTCAACTG GTCTACGGCT ATGGCGCCGA CAAATTAAAA
TCCGCACTGG GTGAGCAGCA ATTAAATTGG ATGTTGCAAG CCGAGCAGTT AGGCACTGGC
CATGCGGTTG CTCAGGCGAT TCCTAATATC GACGACAATG ACACTGTGCT GATCCTTTAC
GGTGATGTGC CCTTGATCCA AGCCTCGACC CTGGAAGCCT TGCTCGCTGC GCGTCCTGAT
CATGGCGTGG CGATTTTAAC CGTCAACCTT GTTAACCCGA CAGGCTATGG TCGTATTGTG
CGCGAGCAAG GCAAGGTTGT CGGCATCGTC GAGCAAAAGG ATGCCAATGC TGAACAGTTA
GCCATCAATG AAATCAATAC CGGCATAATG GCAGTGCCGG GCAAGGCATT AAAAACCTGG
CTTGGCCGCC TATCGAATAA CAATGCTCAG GGTGAATACT ACCTGACCGA CATTATCGCC
ATGGCCCACG CCGATGGCGT TGAAATTAAT ACCGCTCAGC CACAATCAGC CATCGAGGTG
GAAGGTGCTA ATAACCGCGT GCAGCTTGCA CAACTCGAGC GCGCTTATCA GGCCCGTGAA
GCCGAAAAGT TAATGATTGC TGGTGCTAAT CTACGTGACC CAAGCCGTAT CGATATCCGT
GGTGAAGTGA CCGTGGGTAT GGATGTGATG GTCGATGTTA ACGTGATTTT CGAAGGTAAA
GTAGTGATTG GTAATAACGT TAGCATCGGC GCTGGTGCGA TTCTTATCGA CTGCGAAATT
GCCGATAATG CCGAAATCAA ACCTTACTCT ATTATCGAAG GCGCTAAGCT AGGCGTTGCC
GCCAGTGCGG GGCCTTTTGC CCGTTTGCGC CCTGGTGCCG AACTGATGCA AGATGCGCAT
ATCGGCAACT TCGTTGAGAT GAAAAAAGCC GTGTTAGGTG TAGGTTCTAA GGCGGGTCAC
TTAGCCTATT TAGGCGATGC GCAAATCGGG GCGGGTGTGA ATATTGGTGC CGGCACTATT
ACCTGTAATT ACGATGGTGC CAATAAACAC TTAACCGTGA TTGAAGATAA TGTGTTTGTG
GGGAGTGATA CTCAGCTGGT GGCGCCGGTG ACCATTGGTA AAGGCGCGAC GCTCGGTGCG
GGGTCAACCA TTACCCGTGA CGTGGGTGAG GATGAGCTAG TGATCACCCG TGTTAAGCAA
AAACATCTGA CAGGCTGGCA ACGTCCGGTA AAGATTAAGA AGTAA
 
Protein sequence
MALNVVILAA GKGTRMRSDL PKVLHPIAHK SMVQHVIDTA HSIGSDAIQL VYGYGADKLK 
SALGEQQLNW MLQAEQLGTG HAVAQAIPNI DDNDTVLILY GDVPLIQAST LEALLAARPD
HGVAILTVNL VNPTGYGRIV REQGKVVGIV EQKDANAEQL AINEINTGIM AVPGKALKTW
LGRLSNNNAQ GEYYLTDIIA MAHADGVEIN TAQPQSAIEV EGANNRVQLA QLERAYQARE
AEKLMIAGAN LRDPSRIDIR GEVTVGMDVM VDVNVIFEGK VVIGNNVSIG AGAILIDCEI
ADNAEIKPYS IIEGAKLGVA ASAGPFARLR PGAELMQDAH IGNFVEMKKA VLGVGSKAGH
LAYLGDAQIG AGVNIGAGTI TCNYDGANKH LTVIEDNVFV GSDTQLVAPV TIGKGATLGA
GSTITRDVGE DELVITRVKQ KHLTGWQRPV KIKK