Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3913 |
Symbol | |
ID | 4254476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4666439 |
End bp | 4668244 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638120558 |
Product | hypothetical protein |
Protein accession | YP_736033 |
Protein GI | 113972240 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.10642 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAAAC TCTTTACCCC AAGCTTACTG ATTTGCGCAC TTAGTGCCTG TAGCGCGGTT CAGCCCCCAA TCGAATCCAC CAAACAAACA ACGGTAGCCG TTGCGCAGTC CACGGCCAAG ACTATGGCCC CAGCACTGCA AGCAATAGTG GATCAAAGTT GGCAACTCCA ACTCAGTGCC AGCCCTGAAA TGGCCTATGG AATGGGGGAT AAGAGTGCTG CGGGTAAACT GCAAGATCTG TCTCCCGAAG CCTTAGCTAA GCTCAATCAG GGACAAATGG CCATTCTCGC CCAATTGAAA GCACTGGATC GCAGCAAACT GAGTAAAGAG GATAAAATCA ACGCCCAAAT CCTCGAAGAT CAGATCCAAA ATGAGGTCGA CCTGTATAAA TACAAGGATT ACTACCTGCC GATCACCGCA GAGAGTGGCT TCCACGCCTA TATATCTTCC ATTGCGCAAG GGCGGTTCAA CACTCTAGAG GATTACCAAA ACTACCTAGG TAAGCTCAAG GCACTACCGA CCTATTTTGC CCAGCAAACC CATTGGTTAA AACAAGGCTT AAAGGAAGGG ATTACGCCCC CTAAAGCCAC GCTTAAGGGA TTTGAAAACA GCATTAGTGC ATACATCTTA CCGGTAGAGA AAAGTAGTTA TTTCAAGCCT TTTACTCAAT ACCCAAGCCA CTTTACTGAG GCGCAAAGAG CGCAACTGAC CCAAGAAGGC CGAGCATCGG TCGAGCAGAA TGTGCTCCCA ACCTATCAGG CTTTTTATGA TTTTATGACT CATGAGTATA TGCCCAACAC TCGGGAAAAT ATTGCCGCCA ACAGCTTACC CGATGGTGAT GCCTTCTATG AAAACCGCGT TCGTTACTAC ACGACCTTAA ATATGACCTC GGCCGAAGTG CACGAGCTTG GTTTAAAAGA AGTGAAGCGT ATCCGTCAGG AAATGGAGCA AGTCATTAAG TCTGTTGGCT TTAAAGGCAG CTTTGCCGAC TTTTTACATT TCTTACGAAC CGATCCCCAG TTTTATACTA CTAGTGCGGA TCAGCTCCTG AAGGAAGCGG CCTTTATTGC CAAAAAAGCA GATGCCATGT TACCTAAATA TTTTGGTAAA TTGCCGCGAA AACCCTATGG TATCGCGCCA GTGCCTGCCG AAATCGCCCC TAAATACACT TCAGGCCGTT ATTCAGGCTC TAATCGTGAT GACGAGCCGG GTTACTACTG GGTTAATACC TACGCCTTAG ATAAGCGCCC GCTCTATGAA CTCGAAGCGC TAACGCTGCA CGAAGCCGTG CCCGGGCATC ATCTGCAGAT TTCACTTAAC TCCGAACTGA GCTCATTGCC CGATTTTCGT CGCTACAGCT ATATTTCGGC CTTTGGTGAA GGTTGGGGAT TGTATAGCGA GTACTTAGGC TTAGAAGCGG GATTCTATCA AGACCCTTAC AGTAACTTTG GACGCCTCAC TTACGAGATG TGGCGCGCCG CTCGTCTCGT TGTCGATACG GGGATGCACG CCCAAGGTTG GAGTCGAGAA CAAGCCATCG AGTTTATGGC GAGCAACACG GCGTTATCGC TCCACAATGT GACCACTGAG ATTGACCGCT ACATTACCTG GCCAGGGCAA GCGCTCTCCT ACAAGATTGG TGAGCTCACC ATTAAACGCC TGCGCGTGAA AGCCGAGCAA GCCTTAGGCG ATAAATTTGA TATTCGCGCC TTCCACGACG CGGTATTAGA AAATGGTTCT GTGCCTATGT CGGTGCTGGA GCAGCAAATA AACGACTTTA TCGAAGCGCA AAAAGCCGCG ATTTAA
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Protein sequence | MHKLFTPSLL ICALSACSAV QPPIESTKQT TVAVAQSTAK TMAPALQAIV DQSWQLQLSA SPEMAYGMGD KSAAGKLQDL SPEALAKLNQ GQMAILAQLK ALDRSKLSKE DKINAQILED QIQNEVDLYK YKDYYLPITA ESGFHAYISS IAQGRFNTLE DYQNYLGKLK ALPTYFAQQT HWLKQGLKEG ITPPKATLKG FENSISAYIL PVEKSSYFKP FTQYPSHFTE AQRAQLTQEG RASVEQNVLP TYQAFYDFMT HEYMPNTREN IAANSLPDGD AFYENRVRYY TTLNMTSAEV HELGLKEVKR IRQEMEQVIK SVGFKGSFAD FLHFLRTDPQ FYTTSADQLL KEAAFIAKKA DAMLPKYFGK LPRKPYGIAP VPAEIAPKYT SGRYSGSNRD DEPGYYWVNT YALDKRPLYE LEALTLHEAV PGHHLQISLN SELSSLPDFR RYSYISAFGE GWGLYSEYLG LEAGFYQDPY SNFGRLTYEM WRAARLVVDT GMHAQGWSRE QAIEFMASNT ALSLHNVTTE IDRYITWPGQ ALSYKIGELT IKRLRVKAEQ ALGDKFDIRA FHDAVLENGS VPMSVLEQQI NDFIEAQKAA I
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