Gene Shewmr4_3912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3912 
Symbol 
ID4254475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4665232 
End bp4666227 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content50% 
IMG OID638120557 
Productadenosine deaminase 
Protein accessionYP_736032 
Protein GI113972239 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1816] Adenosine deaminase 
TIGRFAM ID[TIGR01430] adenosine deaminase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0265646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATA CATCCATTCC ATTGGTGGAT TTGCATCGTC ACTTAGATGG TAACGTGCGA 
GTGAACACCA TTTGGGAACT CGGACACCAA CACGGCATTG CTTTACCTGC CGATTCTTTA
GAGACTCTCG CGCCATTTGT ACAAATTCAG GGGAAAGAAA CCAGCTTAGT CGCCTTCTTG
AAGAAGCTTG ACTGGATGGT GGCAGTTCTA GCTGATTTAG ATGCGGTAAA ACGTGTCGCC
TATGAAAACG TGGCCGATGC GGCGTTATCT GGCCTTGATT ATGCGGAGCT GCGTTTTAGC
CCATATTACA TGGCGATGAA CCATAAACTA CCGATTGAAG GTGTGGTTGA AGCGGTTATC
GACGGGGTGA AAGCGGGCCT GAAAGATTAC CAAGTTAAAA TCAATCTTAT CGGGATTATG
TCGCGCTCAT TCGGCCAAGC TGCTTGTACT CAGGAGCTTG AAGGCCTGCT CGCCCATAAA
CAACATTTAG TCGCGATGGA TTTAGCCGGC GATGAGCTGG GTTTCCCTGG CGAATTGTTT
AACGAACACT TTAAGCGGGT GCGAGACGCG GGCTTAGCCA TTACCGCCCA TGCGGGGGAA
GCGGCCGGTT CACAAAGTAT GTGGCAAGCG ATTCAGGAGC TGGGTGCAAC ACGTATCGGC
CATGGTGTGA ATGCGATACA CGATCCTAAG CTGATGGAAT ATCTCGCTAA ACACCGTATC
GGGATCGAAT CTTGCCCAAC CAGCAACCTG CACACCTCGA CCGTGTCTTC CTATGCAGAA
CATCCCTTCA GAACCTTTAT GGATGCCGGT GTGTTGATAA GCCTTAACAC CGATGATCCG
GGTGTGAGTG CGATCGATAT CAAGCATGAA TACCGCATTG CTAAGTCTGA ACTGAGACTA
AGCGATGCTG AGCTGGCTCA GGTGCAACGC AACGGGGTGG AAATGGCGTT TTTATCCGAG
AGCGAGCGCA AGGCGCTGTA TGCGGCTAAA GCTTAA
 
Protein sequence
MINTSIPLVD LHRHLDGNVR VNTIWELGHQ HGIALPADSL ETLAPFVQIQ GKETSLVAFL 
KKLDWMVAVL ADLDAVKRVA YENVADAALS GLDYAELRFS PYYMAMNHKL PIEGVVEAVI
DGVKAGLKDY QVKINLIGIM SRSFGQAACT QELEGLLAHK QHLVAMDLAG DELGFPGELF
NEHFKRVRDA GLAITAHAGE AAGSQSMWQA IQELGATRIG HGVNAIHDPK LMEYLAKHRI
GIESCPTSNL HTSTVSSYAE HPFRTFMDAG VLISLNTDDP GVSAIDIKHE YRIAKSELRL
SDAELAQVQR NGVEMAFLSE SERKALYAAK A