| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3899 |
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| Symbol | |
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| ID | 4254462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4650182 |
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| End bp | 4650829 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638120544 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_736019 |
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| Protein GI | 113972226 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC GCGACAAAAT CATCTATGCC AGCCTTGAGC TATTCAATGA GCACGGCGAA
CGAAATATCA CCACCAATCA TATTGCCGCT CACCTGAATA TGAGTCCCGG GAATCTTTAT
TATCACTTCC GTAATAAGGA AGACATTATC CGCTCGATCT TCAGTCTCTA CGAGGCGCAC
CTAGAATCGG GATTCCAACC CTATGAAGGC GAGCAAGTCA ATGTTGAGCA ATTGATCGGC
TATTTCGACG CGATGTTTTA TACCCTGTGG CAATTCCGTT TTATGTACGC CAATCTTGCC
GATATTCTCG CCCGCGATGA AGAATTAAAA AGCCGTTATC TGCAGGCGCA GCAGCAAGTA
TTAACGCGTT CGAGCCACGT GCTGGATAAA CTCAAGCAGG ATGGTTTTTT AAATATCGAC
AATGACAAAA TCACCCAACT TGCCGACACC ATTAAGATGA TTGTGAGTTT TTGGATTGGT
TATCAACTCA CCCAATCCAG CACTTCAACC ATCACTAAAG GCATTCTGTA CGAAGGTGTA
CTGCGGGTAT TGATGATTTT TAAGGCCTAC GCCACCCCAA CATCTCAAGC GACCTTCAGC
CGTTTAGAGC AACACTATCA CGAGCTAGCG ACCCAAGATT CACTCTAA
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| Protein sequence | MKTRDKIIYA SLELFNEHGE RNITTNHIAA HLNMSPGNLY YHFRNKEDII RSIFSLYEAH
LESGFQPYEG EQVNVEQLIG YFDAMFYTLW QFRFMYANLA DILARDEELK SRYLQAQQQV
LTRSSHVLDK LKQDGFLNID NDKITQLADT IKMIVSFWIG YQLTQSSTST ITKGILYEGV
LRVLMIFKAY ATPTSQATFS RLEQHYHELA TQDSL
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