| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3898 |
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| Symbol | |
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| ID | 4254461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4648662 |
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| End bp | 4649987 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638120543 |
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| Product | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein |
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| Protein accession | YP_736018 |
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| Protein GI | 113972225 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.815164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAACAT TGCCGCTATT CATCAGGCAA AAACTCATAA GCACGATTTT TATGAATCGA
TTTTTTTACA GTGTGCTGCT TTATCTATTA TCCCCTCTGC TCATTGTCTA TTTGGCGTTC
CGTGCCATTA AAAGCCCTGA TTACCGTGGC CGCTGGGGCG AACGTTTCGG ATTAACACGA
CTGGCACCAA CGGATTTACT GATCCACTCG GTTTCCATGG GCGAAACACT GGCGGCGATT
CCGTTAATCC GCCAGATCCA ACAGGTTCAT CCACAGCTTA AGATTACGGT CACAACCTCA
AGCCCGACGG GTTCTGCTGA GGTGCGTAAA GCCTTTGGTG ATCAAGTGCA GCATTGCTAC
TTACCCTTCG ATTTGCCTTG GTGTGTGAAC CGCTTTCTGC GCCAGTTATC CCCTAAATGG
TGCATCATTA TGGAGACTGA GCTGTGGCCG AATCTCGTGG CGCTGGCGGC TAAGCGCGGT
GTGCGCTTGA TGCTCGCTAA TGCTAGGTTG TCGGCTAAAT CGGCGGCGCA GTATGCCAAG
CGTCCACAGT TGAGTCGCCC CATGTTGCAA CGTCTAGATG TCATCGCGGT GCAGACGCAA
GCCGAGGCGC AGCGATTTAT CGACCTTGGG GTGCCTGCTG ATAGAGTCAC AGTTTGCGGC
AGTTTGAAGT TTGATTTAAC TATCACCCCT GAACGATTAA CCCTAGCGCG AGAGCTAAGG
CAGACTTGGG GGAAAGAAAC GGCGCCCGTG TGGGTGGCTG GGAGTGTTCA CCCCGGTGAG
TTTGATGCCG TGCTGAGCGC CCATAAGCAG TTGCTTGCCA AGTGGTCAGA GGCGTTATTG
GTGATTGCGC CACGTCATCC TGAGCAGTTT GCGGCGGTGG CCGATGTAGT CGCCAGCCAA
GATTTTGAAT TTATGCGCCG CAGTGAGGCT CAAGCGATTA CTGCCACGAC GCAGGTGCTG
GTGGGGGATA CCATGGGTGA ATTGTTAACC TTCTATGGCG CTGCCGATCA AGCCTTTGTG
GGTGGGACGT TAATTGAAAA TGGTGGCCAT AATCCCTTAG AGCCCGTGGC CATGGGCGTA
CCTGTGATGG TGGGGCCGAA TCATTGGGAT TTTGCCCAAA TTACCCAAAT GTTGGCAGAT
GCTGGCGGCC TGCGGATTGT GAGTTCAGGC CAAGAGTTGG GTGAGAATTT AATTCAGTAT
TTTGAGCAAC CTGCGTTACG CCAACAAGCC GCAGAGGCAG GTCTTGCCGT GGTAGAGGCT
AATCGTGGTG CCTTGCAGCG TCAGTTTGCT CTAGCCGAAT CCTTACTCTC GCGCCAAACT
GCCTAA
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| Protein sequence | MLTLPLFIRQ KLISTIFMNR FFYSVLLYLL SPLLIVYLAF RAIKSPDYRG RWGERFGLTR
LAPTDLLIHS VSMGETLAAI PLIRQIQQVH PQLKITVTTS SPTGSAEVRK AFGDQVQHCY
LPFDLPWCVN RFLRQLSPKW CIIMETELWP NLVALAAKRG VRLMLANARL SAKSAAQYAK
RPQLSRPMLQ RLDVIAVQTQ AEAQRFIDLG VPADRVTVCG SLKFDLTITP ERLTLARELR
QTWGKETAPV WVAGSVHPGE FDAVLSAHKQ LLAKWSEALL VIAPRHPEQF AAVADVVASQ
DFEFMRRSEA QAITATTQVL VGDTMGELLT FYGAADQAFV GGTLIENGGH NPLEPVAMGV
PVMVGPNHWD FAQITQMLAD AGGLRIVSSG QELGENLIQY FEQPALRQQA AEAGLAVVEA
NRGALQRQFA LAESLLSRQT A
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