| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3867 |
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| Symbol | |
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| ID | 4254430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4614556 |
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| End bp | 4616745 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120512 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_735987 |
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| Protein GI | 113972194 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACCA GAAATACCGT CTTTAGAGTG TCGTCCTTAG CGCTGGCAAT TGGACTGAGT
TTTACCGCCT CAGCCGATGA AATCGCCCGC GATCCCCTGT TGAATGTGAA TGAAGTCATT
GTCGTCCATG GTGAAGGTGC CGATGCGGAG CAATTGGCTA CCACCCATTG GAGCATCGAC
GAAGCCGAAA TTCGTGCCTT GGGTGCACAG ACCTTAGATC AAGTGCTGAA GAATGTACCC
GGGGTTTATA TCCGTGTGGG TGGCGATGGC ACTCCTAGGG TCGATATCCG TGGTTTTAAG
ACCCGCCATG TCACTCTGTT GGTGAACGGC GTGCCTATGA GCAGTGCCGA TGATGGCCAG
TTCGACCCAA GCGTGATCCC AACCAGCCAA ATTGCCTCGG TTGAAGTGTC AGTTGGCCCG
ACTTCAGTGC TGTACGGCCC AAGCGGCGCC GGCGGTGTGA TCAATATTAT TACTAAACAA
GGCAGCACAG CGCCCGCCTT GTCAGGACGC TTGGAAGCGG GTAAAGACAA TACTTTTAAT
GGCGATATCA GCGCCGCTGG CTCGGGTGAT GATTGGCAGG GATTGGTGAG TGTGAGCCGT
CAACAGACCG ATGGTTTCCC GATGTCGAAC GATTTCGAGC CGACCCAATA TCAAGACGGT
GAGCTGAGAG TTAACTCAGA TAAAGAAGTC ACCAACGTCT ATGCCCAAGG CAGCTATTGG
TTATCGGATA AGACACAGTT GATCGCCAAT ATGGCACTGC GTAATGGTGA GTGGGGTAAA
CCCTCACGTG ATGGTACTGG CAGTGGTAAG CTCAAGTATG AGCGTACCGA CGACTATGAT
TCGCATACCT TCCAACTCGG CTTAGCCCAT CAGTTTGATG ATACCTTTAC CCTGCGCGGA
TTTGGTTATC ACAATCAAAG CGATACCTTA GAAGCAGCCT ATGCCGATGA AACCTATCAA
GCATTGACGC AAACCCAAGA TGGCCATTCC GTGGTGCAAG GGGTCAATTT ACAGTTAATC
ACCGATTTTC ATAAAGCAGG GCTGTTAACC ACCTCTGTGA TTGCTGAAGA GCAGAGCTGG
AAGTCTGTAG TGGACACTTA CTCCAGTAAC GCTGGCAGCG GTACTGGCAA TAACTCGGGT
ACAGGCACTG GTTCAGGTTC TGGCAGCGGC TCAGGTAGCG GCAGTGGAAC AGGCTCTGGC
AGCGGCTCAG GTAGCGGCAG TGGAACAGGC TCTGGCGGTG GCACGGGTAG CGGCGGCGGA
ACAGGCTCTG GTGGTGGCGG TGGCACGGGT AGCGGCGGCG GAACAGGCTC TGGCGGTGGC
AATGGTGGCG GTTCTGGCGG CGCAGAAAAC CTAAATGATT CTGCATGGTT ATATACTGCA
GCGGCCGAAT ATCAGTATCA GTCAGAGCAT AACTATGGCT TCACCTTGGG CGGGGCTTAC
CATTCACTCG ATACTTCAGA CGGTACGGAT GATAACTACT CGGCGATGGC GTCTAGTTAT
TGGCAGCTTG TGCCTGACTC ACGTTTGAGC CTGAGTGTGG CACGCAAAGT ACGTTTTCCT
TCTATGGTGA ATTTGTACTC GCAATCATCG GGTAACAGTG AGTTAGAAGC GGAAGAGTCT
AAACATGTTG AGCTGGGTCT GGATCAAAAC CTACCCGCCA GTACCGACTT CTCGCTCTAC
GGTTTTTACA CCGATGCGAA GAACTACATC GCCAAAGATA CTGATGGTTT CTACCAAAAT
ATGGGGCGCT ATGAGTTCAA AGGGGTTGAT TTCCAGATTA ACAACCATGC GATTGAGCAT
TTAGATCTGA GCTTCTCCTA CAGCTTCCTA GACTCGAAAG AAATGGAAGG CGACGATACC
TTAGATGCGC TGCAATACCG TCCTCGTCAC CAGCTGCGCT GGCAAATGAG CTACGAATTT
CCATTCGAAA CTCAAGTCCA CCTCAATGTG GAGCGTATCC TCGATCAGGT TTATGCGACT
CAGGTGAAAG TGAACGGTCA GAACCAGTAT CAACAGCAGT CGCTGGATAA TTACACCTTA
GTGGATATCA ACTTAGTGCA GCCGCTGATC GCCGATAAGT TAGAAGTGTA TCTGCGCGCC
ACTAACCTAT TGGATGAGAA CTACTACCAG AGTGAAGCAT TGCCTCAGGC TGGCCGTCAG
TTCTTCGTTG GTGTGAACTG GCAGATTTAA
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| Protein sequence | MITRNTVFRV SSLALAIGLS FTASADEIAR DPLLNVNEVI VVHGEGADAE QLATTHWSID
EAEIRALGAQ TLDQVLKNVP GVYIRVGGDG TPRVDIRGFK TRHVTLLVNG VPMSSADDGQ
FDPSVIPTSQ IASVEVSVGP TSVLYGPSGA GGVINIITKQ GSTAPALSGR LEAGKDNTFN
GDISAAGSGD DWQGLVSVSR QQTDGFPMSN DFEPTQYQDG ELRVNSDKEV TNVYAQGSYW
LSDKTQLIAN MALRNGEWGK PSRDGTGSGK LKYERTDDYD SHTFQLGLAH QFDDTFTLRG
FGYHNQSDTL EAAYADETYQ ALTQTQDGHS VVQGVNLQLI TDFHKAGLLT TSVIAEEQSW
KSVVDTYSSN AGSGTGNNSG TGTGSGSGSG SGSGSGTGSG SGSGSGSGTG SGGGTGSGGG
TGSGGGGGTG SGGGTGSGGG NGGGSGGAEN LNDSAWLYTA AAEYQYQSEH NYGFTLGGAY
HSLDTSDGTD DNYSAMASSY WQLVPDSRLS LSVARKVRFP SMVNLYSQSS GNSELEAEES
KHVELGLDQN LPASTDFSLY GFYTDAKNYI AKDTDGFYQN MGRYEFKGVD FQINNHAIEH
LDLSFSYSFL DSKEMEGDDT LDALQYRPRH QLRWQMSYEF PFETQVHLNV ERILDQVYAT
QVKVNGQNQY QQQSLDNYTL VDINLVQPLI ADKLEVYLRA TNLLDENYYQ SEALPQAGRQ
FFVGVNWQI
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