| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3837 |
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| Symbol | |
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| ID | 4254400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4582017 |
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| End bp | 4583165 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638120482 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_735957 |
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| Protein GI | 113972164 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCAGA CAATTAAACT TGCCTCAGTA ATCAGCGTGG CGTTGTGGAT GGCAGCTTGT
AGCCCTCAAG AGGATAAAGC CGCTCATGGC GGCGCAGGGC CGCAGAGCAT AGAAGTTGGG
GTAATCAATG TGGCGGCTAA GCCTCAGGTT ATCCAAGTCG AATTACCAGG CCGTAGCAAG
GCGTTCCTCG AAGCCGAAGT GCGTCCTCAA GTGAATGGCA TCATTACCAA ACGTAGTTTT
GTTGAAGGCG GCAATGTTAA GCAGGGCGAG TCCCTCTATC AAATTGATTC AGCGCCTTAC
AAAGCTGCAC TCGTGAGCGC GAATGCCGAT TTAGCCAGAG CGAATGCAAG TCTTGCTTCT
GCCAAAGCAA AAGCCGCTCG TTATCAGCAG TTAGTGAAGA CTAACGCTAT CAGTAAACAG
GATTTCGACG AAGCTGAAGC GGCTTACAAA GAAGCGCTGG CGAGTGTCAC TGTCGCTGAA
GCTGCCATCA ACACCGCGAA AATCAACCTC GAATACACCG AAGTGTTAGC GCCTATTTCC
GGCCGTATCG GTAAATCGAG TGTGACAGCG GGTGCGCTAG TAACGGCTAA CCAAAGCCAA
ACATTGGCGA CCATTCAACA GCTCGATCCA ATCAATGTGG ATATCGCCCA GTCAAGTGCT
CAACTGTTAC GCCTAAAAGC CAAGTTGAAG CAAGGTAAAC TGCAGGCGGC CGATAATGCT
GACGTGCAGT TAGTCTTAGA AGACGGCACT GTTTATGGTC ACAACGGTAA GTTGCAATTT
GCCGAAGTGA GCGTGGATGA GAACACTGGC TCAGTGATCC TGCGTGCAGA GTTTCCGAAC
CCCGATGGCA TCTTATTGCC TGGCATGTAT GTTCGCGCCG TATTGAATAC CGGTACCGAT
CCTCAAGCCA TTTTGGTGCC GCAAAAGGCC ATTAGCCGAA ATGCGAAGGG ACAAGCTGTG
GCTATGGTGG TGAACGATCA AGGCGTAGTT GAAGCAAAAA TTGTTACCAC AGCTGAAGTT
ATCGACAATC AATGGCGTAT TACTGCAGGT TTGGAAGCGG GCGATAAGTT GATTGTGGAA
GGATTACAAA AGATCCGTCC AGGTGCACCA GTCACTCCCA AAGTTATTTC TGAAACCCAA
GCACAATAG
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| Protein sequence | MRQTIKLASV ISVALWMAAC SPQEDKAAHG GAGPQSIEVG VINVAAKPQV IQVELPGRSK
AFLEAEVRPQ VNGIITKRSF VEGGNVKQGE SLYQIDSAPY KAALVSANAD LARANASLAS
AKAKAARYQQ LVKTNAISKQ DFDEAEAAYK EALASVTVAE AAINTAKINL EYTEVLAPIS
GRIGKSSVTA GALVTANQSQ TLATIQQLDP INVDIAQSSA QLLRLKAKLK QGKLQAADNA
DVQLVLEDGT VYGHNGKLQF AEVSVDENTG SVILRAEFPN PDGILLPGMY VRAVLNTGTD
PQAILVPQKA ISRNAKGQAV AMVVNDQGVV EAKIVTTAEV IDNQWRITAG LEAGDKLIVE
GLQKIRPGAP VTPKVISETQ AQ
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