| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3805 |
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| Symbol | |
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| ID | 4254368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4542937 |
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| End bp | 4543743 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638120450 |
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| Product | competence protein ComF |
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| Protein accession | YP_735925 |
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| Protein GI | 113972132 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.274004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGGCG ATAGCAAATG GACTTGGTCG CAACAGGGGG CGAAGCTGTT ACGCATAGTT
TCGCATTTGG GGCAGCGTTA CTTGGCGGGC AGTTTACCTA ACCGCTGCTT ACTGTGCCAC
CAATCCCTCA ATGCAAAGGA AGCCGGATTT TGCCAGATAT GCCTGCAAAC GGGCTTATAT
CACAGCCCAA TTTGTTTAGG TTGTGGAAAA TCCATGCCGC TTGAACTCGA ATATTGCGGT
GAGTGCCTAA GGCATCAACC GCGAAAAGTC ATCGCACCTT GCAGCTATCA TCAAGGCTTT
GGCCCTTGGA TAGCGGCCAT TAAATATCAG GGGCAACTCG CCGCTCTACC CATATTGTGC
CAAGCCTTAG TAGCGCGCAT TGGTCAGCTC GAACAGCAAG ACTTAATCAC TCTACCGCAG
GCCATAGTGC CAGTCCCTTT ACATCCCAAT CGGCTGCGCC AACGTGGATT TAATCAAGCA
TGGTTAATTG CCCATGAATT ATCGAAGCAG CTCTCGCTGC CACTGGTCAG TGACGGATTA
ATTCGGCGGC AGGATACGCG CCCACAAGCC GGACTCAATG GCGCACAGCG CCGGCGAAAT
CTACAGGATG CTTTCGAGTT AAATGCCGAT TTTGCCTATC AACGGATTGC GCTGGTGGAC
GATGTGGTCA CCACGGGGAC CACAGTGGCA GAAATTGCCC GCTTGTTCGA GGCGCGATAT
ATACAAGTGC AAATATGGTG TCTCGCCAGA GCCGAAGCAC CGGGGTTGTT GGATGATATT
GCGGGTGAAA ACGACATTCC GCGTTAG
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| Protein sequence | MSGDSKWTWS QQGAKLLRIV SHLGQRYLAG SLPNRCLLCH QSLNAKEAGF CQICLQTGLY
HSPICLGCGK SMPLELEYCG ECLRHQPRKV IAPCSYHQGF GPWIAAIKYQ GQLAALPILC
QALVARIGQL EQQDLITLPQ AIVPVPLHPN RLRQRGFNQA WLIAHELSKQ LSLPLVSDGL
IRRQDTRPQA GLNGAQRRRN LQDAFELNAD FAYQRIALVD DVVTTGTTVA EIARLFEARY
IQVQIWCLAR AEAPGLLDDI AGENDIPR
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