| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3799 |
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| Symbol | |
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| ID | 4254362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4536075 |
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| End bp | 4536977 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638120444 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_735919 |
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| Protein GI | 113972126 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAC CACTCTCTAT CAGCAGTCAC CCCAGTGTCC ATTTGGCTTG GCGTGCCTAT
TTTGAGATGA CCAAACCTAA GGTTGTGGCT TTAATGCTGC TCACCGTCTT AGTCGGCATG
TGTTTAGCCA TGCCCACCAT ACTGCCAGTC AAACCCTTAG TGGCAGGCTT ACTCGGCATC
GCCATGATGG CGGGGTCGGC CGCCGCCTTA AACCATCTGA TTGATAGGCG AATCGACGGC
ATGATGGCAC GCACTTATAA CCGTCCGCTG CCCAAGGGCC GAGTCTCAGC GAGAAGAGCG
TTGTTGTTCG CGGCACTCTT AGGCAGCCTA GGTTTTGTGA TCCTCTATGT TTTTACTAAT
CCGCTCACCG CTTGGCTCAC CTTTGCCAGC TTGATTGGTT ACGCCTTGAT TTATACCGCC
TATTTAAAAC GGGCCACACC TCAAAATATT GTCATTGGCG GTTTAGCGGG CGCAATGCCA
CCGCTCTTGG GCTGGACGGC GGTGACGAAT CAATTCCATG GTCATGCGCT ATTGCTCGTC
ATCATCATAT TCCTGTGGAC GCCGCCGCAT TTTTGGGCAC TGGCAATTCA CAGACGCGCA
GAATATGCCA AAGTGGATAT TCCCATGCTG CCCGTGACCC ATGGGGTAGA ATTTACTAAG
ACCTGTATCT TGCTCTATAC GATTTTGCTG GCGATAGCTT GTCTATTGCC CGTGTTAGTC
GGGATGAGTG GACCGCTCTA CTTTGTGTGC TCAAGCTTGC TCAGCACGGG GTTTATTTAT
AAAGCGTGGC AGTTAAAGTA TCAGGATAGC GAAGGGCTGG CGATGCAGGT GTTTCGTTTT
TCGATTTATC ATTTAATGTT GTTATTCATG GCATTACTGC TCGACCACTA TCTTTGGGCT
TAA
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| Protein sequence | MAKPLSISSH PSVHLAWRAY FEMTKPKVVA LMLLTVLVGM CLAMPTILPV KPLVAGLLGI
AMMAGSAAAL NHLIDRRIDG MMARTYNRPL PKGRVSARRA LLFAALLGSL GFVILYVFTN
PLTAWLTFAS LIGYALIYTA YLKRATPQNI VIGGLAGAMP PLLGWTAVTN QFHGHALLLV
IIIFLWTPPH FWALAIHRRA EYAKVDIPML PVTHGVEFTK TCILLYTILL AIACLLPVLV
GMSGPLYFVC SSLLSTGFIY KAWQLKYQDS EGLAMQVFRF SIYHLMLLFM ALLLDHYLWA
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