| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3782 |
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| Symbol | |
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| ID | 4254345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4514094 |
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| End bp | 4515602 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638120427 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_735902 |
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| Protein GI | 113972109 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAT TTTATAAAGT AAAAAAGCCG GGCCCTAAGG CTGTATTGAT ACTCAGCAGC
CTACTGATGG GAACGCCTTG GTTAACCCAA GCACAGCTCG TTAATGCTGC AACACAAGCT
GAAGCGGGCC ACGAACATGC GCACGATACT AACAGCGCAA ATCAAGTCAA AACCTACACT
TGCCCAATGC ACCCCGAGGT TGAAAGTCAC GAACCCGGTC GTTGCCCTAA GTGCAATATG
TTCCTCGTTG AGAAGGAAGA AGAGGAAGAG GCAAGCGCTG CCGGCCAACA TGCGGATCAT
CAAGCCAGTG GCGCAAGCCA AAATGCGGCG CAAGTCTTTG ATACACCAAC GCCTAAAGCC
AATAGCTTAG TCAAGAATCA AAGTTCAGGG GCAACCATAA AATACGTCTG CCCTATGCAC
GCCCACATTA TTAGTGATGT GCCAGGCACT TGCCCTATCT GCGGCATGAA TTTAGAAAAG
GTTGAAACCG GCGGTAATAC CCAAGAAATC AACCTCAACG TCTCTGGCAG CATGCAGCAA
GCACTCGCCC TGAAAGTCGC CGAGGTTAAA CGCGATACCC TATGGAAATT TGTCGAAACA
GTGGGCCAAA TAGACTACGA CGAGAGCCAA ATCAACCATG TGCACGCCCG TGTTACTGGC
TGGATTGAGA AGCTGATGAT CAAATCCGTT GGCGATTCAG TCAAAAAAGG CCAGCTGTTA
TACGAGATCT ATTCACCCGA TCTGATTAAC GCCCAGGATG ACTATCTATT AGCGCTCGAT
ACCTCTAAGG CTTCGGGCAA TAATAACCGT TACCAAGATT TAGTGCGTAA AGCGGGGCTG
CGTTTGTCAT TACTAGGGAT GAATGAAAAG CAAATTCAAC AACTTGCTGA CTCACGTCAG
ACCCAGTACC GCGTGCCTTT CTATGCCCTG CAAGATGGTA TTGTTAAAGC ACTCGATGTG
CGTGATGGCA TGTATATCCA GCCCTCTACT GAGGTGATGT CGGTTGTCGA CCTTTCCAAA
GTGTGGGTGA TCGCCGATGT GTTTGAAAAC GAGCAAAGCT GGATTGCCCT AGGGCAGAAA
GCCGAAGTCT CTGTGCCCGC CATGAATATC AGCGGTATCG AAGGCACCAT TGACTATATC
TACCCAGAGC TTGACCCCAT CACCCGCAGC TTAAGAGTGC GTGTGGTGCT GAATAATACC
GATGTCTCCC TCAGACCTAA GACGCTTGCC AAGGTCTCGC TCTTCGGCGG GCCCAATAAA
GATGTGTTAG TGATCCCGCA GGAAGCCCTA ATCCAAACGG GTAAAGAAAA CCGCGTAATA
GTAAAACAAG CCGATGACAG CTTCACCGCT AAGGCCGTGA CGGTCGGCAT GATGAGCCAA
GGTAAGGCCG AAATAGTCTC GGGTCTCAGT GAAGGTGAAC GCGTGGTGAC ATCGGGACAA
TTCCTACTCG ACTCCGAGGC CAGCCTCAAG GGCAGCTTAA TGCGTTTAAG CAGCGGCCAT
CAGCACTAG
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| Protein sequence | MKQFYKVKKP GPKAVLILSS LLMGTPWLTQ AQLVNAATQA EAGHEHAHDT NSANQVKTYT
CPMHPEVESH EPGRCPKCNM FLVEKEEEEE ASAAGQHADH QASGASQNAA QVFDTPTPKA
NSLVKNQSSG ATIKYVCPMH AHIISDVPGT CPICGMNLEK VETGGNTQEI NLNVSGSMQQ
ALALKVAEVK RDTLWKFVET VGQIDYDESQ INHVHARVTG WIEKLMIKSV GDSVKKGQLL
YEIYSPDLIN AQDDYLLALD TSKASGNNNR YQDLVRKAGL RLSLLGMNEK QIQQLADSRQ
TQYRVPFYAL QDGIVKALDV RDGMYIQPST EVMSVVDLSK VWVIADVFEN EQSWIALGQK
AEVSVPAMNI SGIEGTIDYI YPELDPITRS LRVRVVLNNT DVSLRPKTLA KVSLFGGPNK
DVLVIPQEAL IQTGKENRVI VKQADDSFTA KAVTVGMMSQ GKAEIVSGLS EGERVVTSGQ
FLLDSEASLK GSLMRLSSGH QH
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