| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3751 |
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| Symbol | |
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| ID | 4254314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4484855 |
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| End bp | 4485814 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120396 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_735871 |
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| Protein GI | 113972078 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCG ACAACTTAGC CAGAATCGAT CTCAACCTAC TGGTGATATT GAAGGTTTTG
CTCGAAGAGC AGAGCGTCAC CCGCGCAGCG AGTCGATTAC ATATTAGCCA GTCGGCATTG
AGCAAGAGCT TGAATCGCCT GCGAGAAACT CTAGATGATC CCCTGTTCCA ACGCACTGCC
CACGGCCTAA AACCCACGGC ACATGCGCTC AATATTGGGC TTAAATTGCC GAATATTTTG
CAGGACTTAT ATCAACTCAC TCAGCCACCG ACGTTTACGC CGGCCAGCAG TAACAGGCAG
TTTTCCTTTG CCATGGTTGA AAGCGCCTAC GAAACCTTAA TTCCCTATTT TATCGGCCCA
TTGTTAAGCA CTGCACCGAA TCTGAAGCTC GACTCCTATG TGTGGACCGA GAAATCGATG
CACGATTTGC AGCAGGGGCA AATTGACTTT GGGATCTCGG GGCGGGATCT ACACCCACTG
TCGGACTCGC AAACGGACAG ACTCCCAGAT GGCATTAGCT GCCAAACCCT GTTTACCGAC
AGGCAAGTGT GTTTGGTGCG CCAAGATCAT CCCTTGATGA CTGCACTCAC CTCGCCCCAA
TGGGATTTAT CCATGTACTT GGATATGGCA CATGTGCAGG TTCGTTGTGA AGGGAGTGAT
TGGTGGGCGC TGGATTACTT TCTGGCCGAC CTTGGCCACA GGCGCAAAAT CAGCACGACT
GTACCCGATT TTTATGGCGC GGCCAGCATC TGTGCCCACA GTGATTTAAT TTTCACTTTG
CCGTCGAGCT TTGCACTGCA CGCATGCAAG CTGTATCCAC TGAGGCTATT GCCTCTGCCC
TTTGAATTTA TCCCTATGGC CTATGTGCTG CTCTGGCATC AGCGCAACGA TGAAGACCAA
GGCCATAAAT GGATGCGTGA TACCATCTGC CAAAGTGTTG AAAAGCTTAT GCAACCTTAG
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| Protein sequence | MNLDNLARID LNLLVILKVL LEEQSVTRAA SRLHISQSAL SKSLNRLRET LDDPLFQRTA
HGLKPTAHAL NIGLKLPNIL QDLYQLTQPP TFTPASSNRQ FSFAMVESAY ETLIPYFIGP
LLSTAPNLKL DSYVWTEKSM HDLQQGQIDF GISGRDLHPL SDSQTDRLPD GISCQTLFTD
RQVCLVRQDH PLMTALTSPQ WDLSMYLDMA HVQVRCEGSD WWALDYFLAD LGHRRKISTT
VPDFYGAASI CAHSDLIFTL PSSFALHACK LYPLRLLPLP FEFIPMAYVL LWHQRNDEDQ
GHKWMRDTIC QSVEKLMQP
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