| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3734 |
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| Symbol | |
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| ID | 4254297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4464395 |
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| End bp | 4465330 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120379 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_735854 |
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| Protein GI | 113972061 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.457361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAAC ACTTAGACTT AAACTTACTG CCCGTACTGG AAATTCTCCT CGAGGAGCAG
AGTGTCACGG CCGCAGCGGC GCGGCTGCAT TTGAGTCAGT CGGCGGTGAG CAAGCAATTG
ACTCGCCTGC GTGAAGTGTT TGATGACCCC TTATTCGAGC GCACCGCCTA CGGCCTCAAG
CCGACGCCCA AGGCACTGTC GCTGGCGCCC GATTTACGTC AATGCTTACA GCAATTAGCG
CAATTTACCC GGCCAGACAG TTTTGAACCC GCCTTAAGCC AGCGCCAGTT TCGGATGCAT
CTGGTCGAAA CGACCTATTC GCTGACCTTC CCACACTTTA TGCCTTCGCT CTTAGCGCAG
GCGCCCGGTG TGAGCATTAA TTGCCAAACC TGGCGGCTGG ATACCATGGA CAGACTCCAG
CGCTGCGATA TCGATCTAGC CATAGGTTGT CGCGAATGGG ATGAACGTTC GCCCATGCAC
GTAAACCATA TTCCGGACGA TATCCATTAT GTTGAATTGG TTCAGGATTA CACAGTGTGC
CTGATGCGCC GTGACCATCC TGCACTATCG CAGGAATGGG ATCTCGATAC CTTTTTAAGC
TATCGCCAAT TACAGGTTGC TTTTGGTGGT TTGGAACATT GGTTGTTAGA CGATGTGCTG
CAAATCCAAG GGCGTAAACG GGATATTGCG GTGAATATGA CCGACTTCCA GAGTGCGTTG
GCCCTGTGTG AGCAGAGTGA TTTGATTCTC TGCGCTCCTT CCCGTTATGC CTTGGCGGTG
ATGAAGTCGT TTGATCTTAT GTATTTACCC TCACCGATTA AACTGATCCC CGGTGCGTAT
CTGCTGATGT GGCATAAGCA TTTCGAGCAC GATCTCAGCC ATAAATGGCT GCGGGAACTG
ATTATTAACA AAGTCAGCGC CTCGCTCCCT AACTGA
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| Protein sequence | MLKHLDLNLL PVLEILLEEQ SVTAAAARLH LSQSAVSKQL TRLREVFDDP LFERTAYGLK
PTPKALSLAP DLRQCLQQLA QFTRPDSFEP ALSQRQFRMH LVETTYSLTF PHFMPSLLAQ
APGVSINCQT WRLDTMDRLQ RCDIDLAIGC REWDERSPMH VNHIPDDIHY VELVQDYTVC
LMRRDHPALS QEWDLDTFLS YRQLQVAFGG LEHWLLDDVL QIQGRKRDIA VNMTDFQSAL
ALCEQSDLIL CAPSRYALAV MKSFDLMYLP SPIKLIPGAY LLMWHKHFEH DLSHKWLREL
IINKVSASLP N
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