| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3698 |
|---|
| Symbol | aroK |
|---|
| ID | 4254261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 4413629 |
|---|
| End bp | 4414144 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638120340 |
|---|
| Product | shikimate kinase I |
|---|
| Protein accession | YP_735818 |
|---|
| Protein GI | 113972025 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000225658 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAA AACGTAATAT TTTTCTGGTA GGCCCAATGG GCGCAGGTAA AAGCACAATT
GGTCGCCATC TGGCGCAAAT GCTGCATTTA GAATTCCACG ATTCAGATCA AGAGATTGAG
CAACGCACAG GCGCCGATAT TGCTTGGGTG TTTGACGTTG AAGGCGAAGA AGGTTTCCGC
CGTCGCGAAG CTCAGGTTAT TGCTGATCTG TCTGAAAAAC AAGGTATTGT CCTTGCCACT
GGCGGTGGTT CAGTTCAGAG CAAAGATATC CGTAATCATT TATCTGCTCG CGGTATCGTG
GTGTATCTCG AAACCACTAT CGACAAACAG GTTGCGCGCA CTCAAAGAGA CAAGCGTCGC
CCATTACTGC AAGTAGATGA TCCGCGAGAA GTATTAGAGA ACCTCGCAGA AATCCGTAAC
CCTCTGTACG AAGAAATTGC TGATGTGATC GTTAAAACTG ACGATCAAAG TGCAAAGGTT
GTTGCGAATC AAATCATAGA GAAATTAGGT TTCTAG
|
|---|
| Protein sequence | MAEKRNIFLV GPMGAGKSTI GRHLAQMLHL EFHDSDQEIE QRTGADIAWV FDVEGEEGFR
RREAQVIADL SEKQGIVLAT GGGSVQSKDI RNHLSARGIV VYLETTIDKQ VARTQRDKRR
PLLQVDDPRE VLENLAEIRN PLYEEIADVI VKTDDQSAKV VANQIIEKLG F
|
|---|
| |