| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3677 |
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| Symbol | |
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| ID | 4254240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4392097 |
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| End bp | 4394613 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120319 |
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| Product | anaerobic dimethyl sulfoxide reductase subunit A |
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| Protein accession | YP_735797 |
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| Protein GI | 113972004 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGTA GAAGTTTTTT AAAGATGAGT GCCGCATTAA GTGCTGCTGC GGCCGTCACA
GGTTGTGACT CCAGCTCGAA AGATGTCGAT GTGGTACCAC CAACTCCTCC GGTTACAGAT
GGAGAGATCC AGACCTGGTC TTCCTGCCTG GTCAACTGTG GCTCTAACTG CCCGATCAAG
GTATTCAGTA AAGATGGGGT TATCACCCGC GTTGAGGCCG ACAATGAAAC CACTGACGAA
TATGGCTACA ACCACCAGAT CCGAGCTTGT GCGCGTGGAC GCTCACTCAG ACAACGCACC
TACGCAGCGG ATCGCTTAAA GACACCCATG AAACGTGTCG GTAAGCGCGG TGAAGGCAAA
TTTGTGCCCA TTACGTGGGA CGAAGCAGCC TCAACCATTG CCAGCGAACT GCAACGTATT
ACCGCCGAAT ACACTAACCG TTCAATTTTA AAACTCTACG GTTCTGGTGC TTATTACGGT
TTCTCCAGTT CAAACTGCTT TAACCGCCTG CTGAATCTCA ACGGCGGCTT CCTGAATATT
TATGGTAACT ATTCTTGGGC GCAGCAAATT GAAGCCGCGG CGGCCACTTG GGGTGGCAGC
TCAACCAACG GCAGTTCTAT GGTCTGCGTT GCCGACAGCG ATCTGTTTTT AGGGATTGGT
TATAACCCTA GCGAAATGCG CCAAAGCGGT TCTGGCGAAG GTTACGATTA CCTGCAAGCT
ATTCAAAATA ACCCCAGCAT TGAAGTCATC ATGGTCGACC CAAGATATAC CGACTCCATG
GCGGGCAAGG AAGATCATTG GTATCCAATC CGTCCGGGCA CAGATGCTGC ATTTGCCGAA
GCCATCGCCT ATGAAATGAT TTCTTCAGGC TGGGTCGATG CCAACTCTAA AGCCTTCTTA
GATAAATATT GCGTCGGTTA TGACAAGGCC TCACTCGAAA AAACCAAAGC CGAGTTCGAA
GCATCGGGCG ATGCCAGCAA AGTGGAATAC GCCAAGTTTA TCGATGTCGA AGAAAACTAC
CGCGATTACA TCCTAGGCGT GGGTAAATTC ACCGAGGCCA AAACACCTGC GTGGGCAGCA
ACCGTTTGTG GGATTTCGGA AGCCAACATC AAGGCTATCG CGCAAAAGAT TATGAATGCC
AAGGCACCTT ATATCATCAT AGGTGCAGGT GTTAACCGCC ATGCAAACGG CGAACAGGCG
ATGCGCGCTT GCTATATGCT GCCCTTTTTA ACCGGCAAAG TGGGGCAACC AGGTGTCAAC
AACGGTGCCC TGCCAGTACA AGGCAGTATG AGCAAATCGA GCTTATCAGG CTTGTCGAAT
CCGATTAAAG AAGCCATTTC CTTCTTCACC TTCTCTGAAG CCATCGAACG TGGCGCGGAG
ATGACCGCCC GCAAAGATGG CGTAAGAGGA ATGCCAGATT TAGATACGCC ATTGGGTCAG
AATATTAAGG CCATTTTCGC CATTAACTCT AACTCCCTCG TCAACCAACA TGCCGACTCT
AACGGTACTT CGAAGATTTT GGAGGACGAT ACTAAGTGTG AACTGATCGT GGTAGCCGAT
TGTTGGATGA CGCCTTCGGC ACGTTATGCC GATATCCTCC TGCCAGATAC CAGTTGGTTA
GAGTCAAATG ACCTAGTGGA TGGCAGCTAT GCCACAGGTC TCATGGGCTA CTTAGTCGCC
ATGAAGGCGG CGGTGAAGCC AATGTGGGAA TGTAAGTCCA TGTATGACAT GTGCGGCTTA
ATCGCACAAA AAATGGGCGT TTATCAACAG TACTCTGAAG GTAAAGACGA AACTGCATGG
CTAAATCAGC TCTATGCCGG CACCCTGACT GCGCCTTCAA GCGCCAACGC CATTCCCGCA
TTACCAAGCT CTTATGAAGA AGCCCAAAAG ATTGGGGTGT TCCGCTCCTT CAATGGCACT
AAACGCATCG CCTTAGACAG CTATATTAAT GGCGGTAAAG CCCTCGGCAC ACCTACCGGT
AAAGTCGAAT TCTACTCACT CGATTTTGCG CAAAAAGCGG CGGAATGGGA GTTCGATGCA
AGCGTCAAAG GCAACTACAT CACCGCATTA CCCAAATACC AACCAACTTG GGAAGGCTAT
GAGGATGCCG ACACCATAGA CACTTACCCA CTGCAATTAA TGGGTTATCA CACTAAGGGC
CGTACTCACT CCAGCTATCA CAACGTGGCT TGGCTACGTG AAGCCGTTGA AGATGCAGTC
TGGATGAACC CGATAGATGC CAATGCGCGC GGCTTATCAC AGGGAGATAC GGTCCATGTA
TGGAGCCAGC GTGGCACCAT TGAAATCCCT GTACGCATCA CCCCAAGGGT TGCGCCAGGC
GTGGCCGCAC TGGGTCAAGG CGCTTGGTAT ACCCCAGATC CATCGGGCCG AATCGGTCCA
TCCGGCCATG TGATTGATAT TGGGGGCTGC ATCAACACGC TTACTCGCTA CCAACCTAGC
CCTGCCGCCA AAGGTAACCC ACAACACACT AATCGCGTGC AGATTGCTAA GGCTTAA
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| Protein sequence | MERRSFLKMS AALSAAAAVT GCDSSSKDVD VVPPTPPVTD GEIQTWSSCL VNCGSNCPIK
VFSKDGVITR VEADNETTDE YGYNHQIRAC ARGRSLRQRT YAADRLKTPM KRVGKRGEGK
FVPITWDEAA STIASELQRI TAEYTNRSIL KLYGSGAYYG FSSSNCFNRL LNLNGGFLNI
YGNYSWAQQI EAAAATWGGS STNGSSMVCV ADSDLFLGIG YNPSEMRQSG SGEGYDYLQA
IQNNPSIEVI MVDPRYTDSM AGKEDHWYPI RPGTDAAFAE AIAYEMISSG WVDANSKAFL
DKYCVGYDKA SLEKTKAEFE ASGDASKVEY AKFIDVEENY RDYILGVGKF TEAKTPAWAA
TVCGISEANI KAIAQKIMNA KAPYIIIGAG VNRHANGEQA MRACYMLPFL TGKVGQPGVN
NGALPVQGSM SKSSLSGLSN PIKEAISFFT FSEAIERGAE MTARKDGVRG MPDLDTPLGQ
NIKAIFAINS NSLVNQHADS NGTSKILEDD TKCELIVVAD CWMTPSARYA DILLPDTSWL
ESNDLVDGSY ATGLMGYLVA MKAAVKPMWE CKSMYDMCGL IAQKMGVYQQ YSEGKDETAW
LNQLYAGTLT APSSANAIPA LPSSYEEAQK IGVFRSFNGT KRIALDSYIN GGKALGTPTG
KVEFYSLDFA QKAAEWEFDA SVKGNYITAL PKYQPTWEGY EDADTIDTYP LQLMGYHTKG
RTHSSYHNVA WLREAVEDAV WMNPIDANAR GLSQGDTVHV WSQRGTIEIP VRITPRVAPG
VAALGQGAWY TPDPSGRIGP SGHVIDIGGC INTLTRYQPS PAAKGNPQHT NRVQIAKA
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